Biomass and nutritional qualities of six regenerating hardwood species in the Allegheny hardwood forest type
Metadata:
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Identification_Information:
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Citation:
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Citation_Information:
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Originator: Glover, Laurel M.
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Originator: Volponi, Sabrina N.
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Originator: Royo, Alejandro A.
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Originator: Johnstone-Yellin, Tamara L.
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Publication_Date: 2023
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Title:
Biomass and nutritional qualities of six regenerating hardwood species in the Allegheny hardwood forest type- Geospatial_Data_Presentation_Form: tabular digital data
- Publication_Information:
- Publication_Place: Fort Collins, CO
- Publisher: Forest Service Research Data Archive
- Online_Linkage: https://doi.org/10.2737/RDS-2023-0058
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Description:
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Abstract:
- Herbivores alter plant quantity and quality through direct tissue consumption and indirectly via the structural and chemical allocational strategies plants deploy in response to herbivory. This data publication provides tabular data containing experimental evidence of how white-tailed deer browsing alters their forage resource and, ultimately, their nutritional carrying capacity. Using a large-scale experiment that manipulated deer access (fenced versus unfenced plots), we tested whether browsing altered the nutritional quality and biomass of six regenerating hardwood species (red maple, American beech, birch species, pin cherry, and black cherry), as well as the nutritional carrying capacity using summer (June-August) 2017 data from sixteen sites in early-successional hardwood forests of Pennsylvania, USA. Data include browsable biomass and estimated nutritional carrying capacity (i.e., deer days per hectare) for each site, averaged across these six dominant species as well as for just pin cherry. Also included is browsable biomass for both stem and leaf tissue as well as average nutritional quality data (neutral detergent fiber, dry matter digestibility, and digestible protein) for each of these six dominant species at each site.
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Purpose:
- These data are part of a larger set of sites designed to test how deer browsing affects plant community dynamics and how that impact is modulated by landscape context (Royo et al. 2017). For this study, we focused on 16 sites spanning a wide edaphic gradient to examine how browsing altered the quantity and quality of their forage resource.
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Supplemental_Information:
- For more information about this study and these data, see Glover et al. (in review).
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Time_Period_of_Content:
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Time_Period_Information:
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Range_of_Dates/Times:
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Beginning_Date: 201706
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Ending_Date: 201708
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Currentness_Reference:
- Ground condition
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Status:
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Progress: Complete
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Maintenance_and_Update_Frequency: None planned
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Spatial_Domain:
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Description_of_Geographic_Extent:
- We conducted this study within the Allegheny High Plateau Region of northwestern Pennsylvania, USA in 16 mature second growth forests sites (>75 years). Forest composition at all sites is representative of the Allegheny hardwoods forest subtype of the hemlock northern hardwoods association.
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Bounding_Coordinates:
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West_Bounding_Coordinate: -77.28
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East_Bounding_Coordinate: -71.64
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North_Bounding_Coordinate: 41.98
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South_Bounding_Coordinate: 41.49
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Bounding_Altitudes:
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Altitude_Minimum: 513.69
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Altitude_Maximum: 700.16
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Altitude_Distance_Units: meters
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Keywords:
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Theme:
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Theme_Keyword_Thesaurus: ISO 19115 Topic Category
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Theme_Keyword: biota
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Theme:
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Theme_Keyword_Thesaurus: National Research & Development Taxonomy
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Theme_Keyword: Ecology, Ecosystems, & Environment
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Theme_Keyword: Plant ecology
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Theme_Keyword: Animal ecology
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Theme_Keyword: Wildlife (or Fauna)
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Theme_Keyword: Mammals
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Theme:
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Theme_Keyword_Thesaurus: None
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Theme_Keyword: seedlings
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Theme_Keyword: nutrition
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Theme_Keyword: browsing
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Theme_Keyword: herbivory
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Theme_Keyword: white-tailed deer
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Theme_Keyword: Odocoileus virginianus
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Theme_Keyword: carrying capacity
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Theme_Keyword: digestible protein
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Theme_Keyword: dry matter digestibility
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Theme_Keyword: neutral detergent fiber
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Place:
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Place_Keyword_Thesaurus: None
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Place_Keyword: Pennsylvania
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Place_Keyword: Allegheny High Plateau Region
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Taxonomy:
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Keywords/Taxon:
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Taxonomic_Keyword_Thesaurus:
- None
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Taxonomic_Keywords: single species
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Taxonomic_Keywords: vertebrates
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Taxonomic_Keywords: animals
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Taxonomic_Keywords: mammals
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Taxonomic_Keywords: Odocoileus virginianus
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Taxonomic_Keywords: white-tailed deer
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Taxonomic_Keywords: multiple species
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Taxonomic_Keywords: vegetation
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Taxonomic_Keywords: plants
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Taxonomic_Keywords: Acer rubrum
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Taxonomic_Keywords: red maple
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Taxonomic_Keywords: Betula
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Taxonomic_Keywords: birch
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Taxonomic_Keywords: Fraxinus americana
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Taxonomic_Keywords: white ash
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Taxonomic_Keywords: Fagus grandifolia
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Taxonomic_Keywords: American beech
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Taxonomic_Keywords: Prunus pensylvanica
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Taxonomic_Keywords: pin cherry
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Taxonomic_Keywords: Prunus serotina
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Taxonomic_Keywords: black cherry
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Taxonomic_System:
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Classification_System/Authority:
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Classification_System_Citation:
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Citation_Information:
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Originator: ITIS
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Publication_Date: 2023
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Title:
Integrated Taxonomic Information System- Geospatial_Data_Presentation_Form: on-line database
- Other_Citation_Details:
- Retrieved [July 10, 2023]; CC0
- Online_Linkage: https://www.itis.gov
- Online_Linkage: https://doi.org/10.5066/F7KH0KBK
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Taxonomic_Procedures:
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Taxonomic_Classification:
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Taxon_Rank_Name: Empire
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Taxon_Rank_Value: Biovitae
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Applicable_Common_Name: Carbon-based lifeforms
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Taxonomic_Classification:
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Taxon_Rank_Name: Kingdom
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Taxon_Rank_Value: Animalia
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Applicable_Common_Name: Animal
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Applicable_Common_Name: animaux
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Applicable_Common_Name: animals
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Taxonomic_Classification:
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Taxon_Rank_Name: Subkingdom
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Taxon_Rank_Value: Bilateria
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Applicable_Common_Name: triploblasts
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Taxonomic_Classification:
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Taxon_Rank_Name: Infrakingdom
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Taxon_Rank_Value: Deuterostomia
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Taxonomic_Classification:
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Taxon_Rank_Name: Phylum
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Taxon_Rank_Value: Chordata
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Applicable_Common_Name: cordés
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Applicable_Common_Name: cordado
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Applicable_Common_Name: chordates
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Taxonomic_Classification:
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Taxon_Rank_Name: Subphylum
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Taxon_Rank_Value: Vertebrata
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Applicable_Common_Name: vertebrado
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Applicable_Common_Name: vertébrés
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Applicable_Common_Name: vertebrates
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Taxonomic_Classification:
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Taxon_Rank_Name: Infraphylum
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Taxon_Rank_Value: Gnathostomata
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Taxonomic_Classification:
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Taxon_Rank_Name: Superclass
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Taxon_Rank_Value: Tetrapoda
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Taxonomic_Classification:
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Taxon_Rank_Name: Class
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Taxon_Rank_Value: Mammalia
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Applicable_Common_Name: mammifères
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Applicable_Common_Name: mamífero
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Applicable_Common_Name: mammals
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Taxonomic_Classification:
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Taxon_Rank_Name: Subclass
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Taxon_Rank_Value: Theria
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Taxonomic_Classification:
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Taxon_Rank_Name: Infraclass
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Taxon_Rank_Value: Eutheria
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Taxonomic_Classification:
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Taxon_Rank_Name: Order
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Taxon_Rank_Value: Artiodactyla
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Applicable_Common_Name: artiodactyls
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Applicable_Common_Name: porco do mato
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Applicable_Common_Name: veado
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Applicable_Common_Name: cloven-hoofed ungulates
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Applicable_Common_Name: even-toed ungulates
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Taxonomic_Classification:
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Taxon_Rank_Name: Family
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Taxon_Rank_Value: Cervidae
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Applicable_Common_Name: cervids
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Applicable_Common_Name: caribou
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Applicable_Common_Name: deer
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Applicable_Common_Name: moose
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Applicable_Common_Name: wapiti
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Taxonomic_Classification:
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Taxon_Rank_Name: Subfamily
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Taxon_Rank_Value: Capreolinae
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Taxonomic_Classification:
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Taxon_Rank_Name: Genus
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Taxon_Rank_Value: Odocoileus
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Applicable_Common_Name: mule deer
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Applicable_Common_Name: white-tailed deer
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Taxonomic_Classification:
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Taxon_Rank_Name: Species
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Taxon_Rank_Value: Odocoileus virginianus
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Applicable_Common_Name: white-tailed deer
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Applicable_Common_Name: Venado cola blanca
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Applicable_Common_Name: cerf de Virginie
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Applicable_Common_Name: White-tailed Deer
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Taxonomic_Classification:
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Taxon_Rank_Name: Kingdom
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Taxon_Rank_Value: Plantae
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Applicable_Common_Name: plantes
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Applicable_Common_Name: Planta
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Applicable_Common_Name: Vegetal
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Applicable_Common_Name: plants
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Taxonomic_Classification:
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Taxon_Rank_Name: Subkingdom
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Taxon_Rank_Value: Viridiplantae
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Applicable_Common_Name: green plants
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Taxonomic_Classification:
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Taxon_Rank_Name: Infrakingdom
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Taxon_Rank_Value: Streptophyta
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Applicable_Common_Name: land plants
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Taxonomic_Classification:
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Taxon_Rank_Name: Superdivision
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Taxon_Rank_Value: Embryophyta
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Taxonomic_Classification:
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Taxon_Rank_Name: Division
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Taxon_Rank_Value: Tracheophyta
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Applicable_Common_Name: vascular plants
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Applicable_Common_Name: tracheophytes
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Taxonomic_Classification:
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Taxon_Rank_Name: Subdivision
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Taxon_Rank_Value: Spermatophytina
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Applicable_Common_Name: spermatophytes
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Applicable_Common_Name: seed plants
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Applicable_Common_Name: phanérogames
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Taxonomic_Classification:
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Taxon_Rank_Name: Class
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Taxon_Rank_Value: Magnoliopsida
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Taxonomic_Classification:
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Taxon_Rank_Name: Superorder
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Taxon_Rank_Value: Asteranae
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Taxonomic_Classification:
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Taxon_Rank_Name: Order
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Taxon_Rank_Value: Lamiales
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Taxonomic_Classification:
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Taxon_Rank_Name: Family
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Taxon_Rank_Value: Oleaceae
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Applicable_Common_Name: olives
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Taxonomic_Classification:
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Taxon_Rank_Name: Genus
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Taxon_Rank_Value: Fraxinus
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Applicable_Common_Name: ash
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Taxonomic_Classification:
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Taxon_Rank_Name: Species
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Taxon_Rank_Value: Fraxinus americana
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Applicable_Common_Name: white ash
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Taxonomic_Classification:
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Taxon_Rank_Name: Superorder
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Taxon_Rank_Value: Rosanae
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Taxonomic_Classification:
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Taxon_Rank_Name: Order
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Taxon_Rank_Value: Fagales
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Taxonomic_Classification:
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Taxon_Rank_Name: Family
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Taxon_Rank_Value: Fagaceae
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Taxonomic_Classification:
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Taxon_Rank_Name: Genus
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Taxon_Rank_Value: Fagus
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Applicable_Common_Name: beech
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Taxonomic_Classification:
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Taxon_Rank_Name: Species
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Taxon_Rank_Value: Fagus grandifolia
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Applicable_Common_Name: American beech
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Taxonomic_Classification:
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Taxon_Rank_Name: Family
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Taxon_Rank_Value: Betulaceae
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Applicable_Common_Name: alder
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Applicable_Common_Name: birch
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Taxonomic_Classification:
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Taxon_Rank_Name: Genus
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Taxon_Rank_Value: Betula
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Applicable_Common_Name: birch
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Taxonomic_Classification:
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Taxon_Rank_Name: Order
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Taxon_Rank_Value: Rosales
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Taxonomic_Classification:
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Taxon_Rank_Name: Family
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Taxon_Rank_Value: Rosaceae
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Applicable_Common_Name: roses
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Taxonomic_Classification:
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Taxon_Rank_Name: Genus
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Taxon_Rank_Value: Prunus
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Applicable_Common_Name: chokecherry
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Applicable_Common_Name: plum
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Taxonomic_Classification:
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Taxon_Rank_Name: Species
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Taxon_Rank_Value: Prunus serotina
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Applicable_Common_Name: black chokecherry
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Applicable_Common_Name: black cherry
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Taxonomic_Classification:
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Taxon_Rank_Name: Species
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Taxon_Rank_Value: Prunus pensylvanica
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Applicable_Common_Name: pin cherry
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Applicable_Common_Name: fire cherry
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Taxonomic_Classification:
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Taxon_Rank_Name: Order
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Taxon_Rank_Value: Sapindales
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Taxonomic_Classification:
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Taxon_Rank_Name: Family
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Taxon_Rank_Value: Sapindaceae
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Applicable_Common_Name: soapberries
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Taxonomic_Classification:
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Taxon_Rank_Name: Genus
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Taxon_Rank_Value: Acer
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Applicable_Common_Name: maples
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Taxonomic_Classification:
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Taxon_Rank_Name: Species
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Taxon_Rank_Value: Acer rubrum
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Applicable_Common_Name: red maple
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Access_Constraints: None
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Use_Constraints:
- These data were collected using funding from the U.S. Government and can be used without additional permissions or fees. If you use these data in a publication, presentation, or other research product please use the following citation:
Glover, Laurel M.; Volponi, Sabrina N.; Royo, Alejandro R.; Johnstone-Yellin, Tamara L. 2023. Biomass and nutritional qualities of six regenerating hardwood species in the Allegheny hardwood forest type. Fort Collins, CO: Forest Service Research Data Archive. https://doi.org/10.2737/RDS-2023-0058
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Point_of_Contact:
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Contact_Information:
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Contact_Organization_Primary:
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Contact_Organization: USDA Forest Service, Northern Research Station
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Contact_Person: Alejandro R. Royo
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Contact_Position: Research Ecologist
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Contact_Address:
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Address_Type: mailing and physical
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Address: Forestry Sciences Laboratory
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Address: 335 National Forge Road
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City: Irvine
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State_or_Province: PA
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Postal_Code: 16329
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Country: USA
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Contact_Voice_Telephone: 814-516-5910
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Contact_Electronic_Mail_Address:
alejandro.royodesedas@usda.gov
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Contact Instructions: This contact information was current as of original publication date. For current information see Contact Us page on: https://doi.org/10.2737/RDS.
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Browse_Graphic:
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Browse_Graphic_File_Name:
\Supplements\allegheny_site_map.pdf
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Browse_Graphic_File_Description:
- Map of the Commonwealth of Pennsylvania showing the geographic location of all 16 study sites.
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Data_Set_Credit:
- This project was funded by the USDA Forest Service, Northern Research Station; Bridgewater College; and USDA Agriculture and Food Research Initiative (USDA-AFRI Award No. 12-IA-11242302-093).
Author Information:
Laurel M. Glover
West Virginia University
Sabrina N. Volponi
University of Notre Dame
https://orcid.org/0000-0002-0198-430X
Alejandro R. Royo
USDA Forest Service, Northern Research Station
https://orcid.org/0000-0002-6813-0587
Tamara L. Johnstone-Yellin
Bridgewater College
https://orcid.org/0009-0009-3597-7405
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Cross_Reference:
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Citation_Information:
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Originator: Glover, Laurel M.
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Originator: Volponi, Sabrina N.
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Originator: Royo, Alejandro A.
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Originator: Johnstone-Yellin, Tamara L.
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Publication_Date: Unknown
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Title:
Effect of exclosures on the nutritional value of six species of hardwoods for white-tailed deer (Odocoileus virginianus) in the Pennsylvania Allegheny Forest- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Journal of Fish and Wildlife Management
- Other_Citation_Details:
- [In review]
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Cross_Reference:
-
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Citation_Information:
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Originator: Morgan, Quinn
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Originator: Johnstone-Yellin, Tamara L.
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Originator: Pinchot, Cornelia C.
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Originator: Peters, Matthew
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Originator: Royo, Alejandro A.
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Publication_Date: 2018
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Title:
Partitioning and predicting forage biomass from total aboveground biomass of regenerating tree species using dimensional analyses- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Canadian Journal of Forest Research
- Issue_Identification: 49(3): 309-316
- Online_Linkage: https://doi.org/10.1139/cjfr-2018-0119
- Online_Linkage: https://www.fs.usda.gov/research/treesearch/57697
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Cross_Reference:
-
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Citation_Information:
-
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Originator: Royo, Alejando A.
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Originator: Kramer, David W.
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Originator: Miller, Karl V.
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Originator: Nibbelink, Nathan P.
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Originator: Stout, Susan L.
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Publication_Date: 2017
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Title:
Spatio-temporal variation in foodscapes modifies deer browsing impact on vegetation- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Landscape Ecology
- Issue_Identification: 32(12): 2281-2295
- Online_Linkage: https://doi.org/10.1007/s10980-017-0568-x
- Online_Linkage: https://www.fs.usda.gov/research/treesearch/55499
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Analytical_Tool:
-
Analytical_Tool_Description:
- R is a free software environment for statistical computing and graphics.
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Tool_Access_Information:
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Online_Linkage:
https://www.r-project.org/
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Tool_Access_Instructions:
- see website
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Tool_Citation:
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Citation_Information:
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Originator: R Core Team
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Publication_Date: 2021
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Title:
R: A language and environment for statistical computing- Geospatial_Data_Presentation_Form: software
- Publication_Information:
- Publication_Place: Vienna, Austria
- Publisher: R Foundation for Statistical Computing
- Online_Linkage: https://www.r-project.org/
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Analytical_Tool:
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Analytical_Tool_Description:
- SAS is an integrated software suite for advanced analytics, business intelligence, data management, and predictive analytics.
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Tool_Access_Information:
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Online_Linkage:
https://www.sas.com/
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Tool_Access_Instructions:
- see website
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Tool_Citation:
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Citation_Information:
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Originator: SAS Institute Inc.
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Publication_Date: 2013
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Title:
SAS System for Windows- Geospatial_Data_Presentation_Form: software
- Publication_Information:
- Publication_Place: Cary, NC
- Publisher: SAS Institute Inc.
- Online_Linkage: https://www.sas.com/
Back to Top
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Data_Quality_Information:
-
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Attribute_Accuracy:
-
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Attribute_Accuracy_Report:
- To the best of our knowledge, the values are true and accurate. Data collection in the field was done on paper sheets and these are stored at the USDA Forest Service Research Laboratory in Irvine, PA in our secured location. Data were entered and checked for accuracy by Cori Weldon, data manager (retired). Checks consisted of printing the data entered into Excel and comparing printout against the paper copies.
Variables in these files are for the most part calculated using equations or models. Precision provided in _variable_descriptions.csv is therefore just an estimate.
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Logical_Consistency_Report:
- The data are logically consistent. The consistency was verified as part of the quality assurance that occurred during data analysis.
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Completeness_Report:
- In the allegheny_nutrition.csv file, some species were not present at all sites or one of the two experimental treatment blocks (i.e., fence versus control). In these cases, no data are presented. In the allegheny_biomass_deerdays.csv data file, zeroes represented for some experimental units do represent true zeroes as there was either no browse biomass available and/or the FRESH model was unable to estimate a deer carrying capacity (i.e., DD_ha_..) from the available browse biomass.
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Lineage:
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Methodology:
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Methodology_Type: Field
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Methodology_Description:
- EXPERIMENTAL DESIGN
We conducted our study at 16 northern hardwood forest sites distributed throughout a 6500 square kilometers area of northwestern Pennsylvania, USA. The 16 sites used in this study were selected from a larger set of 25 sites (Royo et al. 2016, 2017) to maximize site productivity differences within the range that existed at all sites and thus broaden the generality of our predictive equations. For the specifics of this approach, see Morgan et al. (2019).
In 15 of the 16 sites, managers conducted the initial cut of a shelterwood sequence to reduce stand relative density (i.e., <75% relative density) and applied broadcast herbicides (tank mix of glyphosate and sulphometuron methyl; Marquis et al. 1992) to control interfering plant species 3–8 years prior to sampling. At a 16th site, managers ultimately chose not to proceed with a harvest but did apply herbicide in 2012. Within each site, we established paired 0.42 hectares (60 × 70 meters [m]) plots and randomly assigned one plot a deer exclosure (fence) treatment while the other served as an unfenced control. Exclosure construction occurred in May–September 2013.
FIELD DATA COLLECTION
At each site we surveyed tree regeneration in from May 29 through August 1, 2017 in 15, 1-square meter (m²) circular quadrats within both the fenced and control areas. Regeneration surveys for data archived herein consists of counts of individuals, by species, in two height classes: 30-150 cm and >150 cm, as seedlings ≥30 cm are commonly accessible to deer. Within each of these two size classes, we also obtained basal diameter measurements of up to five stems per size class to estimate biomass using previously derived allometric equations (Morgan et al. 2019). Additionally, we collected samples of six of the most abundant hardwood species (i.e., these six species represented 94% of all seedlings surveyed in summer 2015) from each plot across three transects (20 m apart) per plot. For each plot, we composited browsable (reachable by deer at ≤1.8 m high) leaves of each species by transect and browsable stems of each species by plot. To preserve nutritional content, we froze all samples until we could proceed with laboratory analysis.
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Methodology_Citation:
-
Citation_Information:
-
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Originator: Glover, Laurel M.
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Originator: Volponi, Sabrina N.
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Originator: Royo, Alejandro A.
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Originator: Johnstone-Yellin, Tamara L.
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Publication_Date: 2023
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Title:
Effect of exclosures on the nutritional value of six species of hardwoods for white-tailed deer (Odocoileus virginianus) in the Pennsylvania Allegheny Forest- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Journal of Fish and Wildlife Management
- Other_Citation_Details:
- [In review]
-
Methodology_Citation:
-
Citation_Information:
-
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Originator: Marquis, David A.
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Originator: Ernst, Richard L.
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Originator: Stout, Susan L.
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Publication_Date: 1992
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Title:
Prescribing silvicultural treatments in hardwood stands of the Alleghenies (revised)- Geospatial_Data_Presentation_Form: document
- Series_Information:
- Series_Name: General Technical Report
- Issue_Identification: NE-96
- Publication_Information:
- Publication_Place: Broomall, PA
- Publisher: U.S. Department of Agriculture, Forest Service, Northeastern Forest Experimental Station
- Other_Citation_Details:
- 101 p.
- Online_Linkage: https://doi.org/10.2737/NE-GTR-96
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Methodology_Citation:
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Citation_Information:
-
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Originator: Morgan, Quinn
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Originator: Johnstone-Yellin, Tamara L.
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Originator: Pinchot, Cornelia C.
-
Originator: Peters, Matthew
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Originator: Royo, Alejandro A.
-
Publication_Date: 2019
-
Title:
Partitioning and predicting forage biomass from total aboveground biomass of regenerating tree species using dimensional analyses- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Canadian Journal of Forest Research
- Issue_Identification: 49(3): 309-316
- Online_Linkage: https://doi.org/10.1139/cjfr-2018-0119
- Online_Linkage: https://www.fs.usda.gov/research/treesearch/57697
-
Methodology_Citation:
-
Citation_Information:
-
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Originator: Royo, Alejandro A.
-
Originator: Kramer, David W.
-
Originator: Miller, Karl V.
-
Originator: Nibbelink, Nathan P.
-
Originator: Stout, Susan L.
-
Publication_Date: 2016
-
Title:
The canary in the coal mine: sprouts as a rapid indicator of browse impact in managed forests- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Ecological Indicators
- Issue_Identification: 69: 269-275
- Online_Linkage: https://doi.org/10.1016/j.ecolind.2016.04.030
- Online_Linkage: https://www.fs.usda.gov/research/treesearch/50925
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Methodology_Citation:
-
Citation_Information:
-
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Originator: Royo, Alejandro A.
-
Originator: Kramer, David W.
-
Originator: Miller, Karl V.
-
Originator: Nibbelink, Nathan P.
-
Originator: Stout, Susan L.
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Publication_Date: 2017
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Title:
Spatio-temporal variation in foodscapes modifies deer browsing impact on vegetation- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Landscape Ecology
- Issue_Identification: 32(12): 2281-2295
- Online_Linkage: https://doi.org/10.1007/s10980-017-0568-x
- Online_Linkage: https://www.fs.usda.gov/research/treesearch/55499
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Methodology:
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Methodology_Type: Lab
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Methodology_Description:
- LAB DATA COLLECTION
We freeze dried all samples using a VirTis BenchTop Pro freeze dryer (SP Scientific, Warminster, PA, USA) for at least 24 hours and ground samples to pass a 1-millimeter (mm) screen using a Wiley Mini Mill (Thomas Scientific, Swedesboro, NJ, USA). Using sequential fiber analysis with sodium sulfite (Goering and Van Soest 1970; Ankom 200 Fiber Analyzer, Ankom Technology, Fairport, NY, USA) we measured fiber content of approximately 0.5 grams (g) of each sample (see Cook et al. 2022) by determining the percent neutral detergent fiber (NDF), acid detergent fiber (ADF), acid detergent lignin (ADL), and acid insoluble ash (AIA). We corrected NDF, ADL, and AIA for potential laboratory analysis bias using correction equations by Cook et al. (2022). Percent crude protein was calculated as 6.25 times the percent nitrogen content (Robbins 1993), which was determined using a Carbon-Nitrogen TruSpec Analyzer (LECO, St. Joseph, MI, USA, Dairy One, Ithaca, NY, USA). Prescence of protein-binding capacity of tannins, which decreases digestible protein (DP) and dry matter digestibility (DMD) (Robbins 1993), was determined using the Martin and Martin (1982) bovine serum albumen (BSA) precipitation assay (Wildlife Habitat Lab, Washington State University, Pullman, USA) in a subset of samples of each species and treatment. Average tannin content was assigned to all samples of the same species and treatment. We used fiber, crude protein, and BSA to calculate percent DMD (percentage of food intake assimilated) and percent DP (percentage of protein assimilated), respectively, using summative equations by Robbins et al. (1987a, b), which incorporate any reduction in digestibility caused by tannins.
We estimated browsable biomass using regression equations developed for these species in the same study area (Morgan et al. 2019). Our biomass estimates used only stem densities of individuals in the >30 cm height classes as these fall within the browsable stratum (Bernes et al. 2018) and our allometric biomass equations are scaled to account for only the fraction of the plant material available to deer in individuals taller than 180 cm (Morgan et al. 2019). For plots that lacked sufficient plant material for nutritional assays we assigned the mean nutritional values of the plot with the most similar productivity characteristics (Morgan et al. 2019), which occurred for fewer than 9% of the plant samples.
Using the estimated browsable biomass (Morgan et al. 2019) DMD, and DP values for each of the six species, we used the Forage Resource Evaluation System for Habitat for Deer (FRESH-Deer) model (Hanley et al. 2012) modified to run in R (R Core Team 2021) to determine the nutritional carrying capacity of the leaves and stems of each species in each plot. This model defines nutritional carrying capacity by the number of days a given plot can support a female deer with one fawn (deer days ⨯ ha⁻¹). As suggested by Hanley et al. (2012) we used the nutritional requirements of a lactating deer with one fawn (daily metabolic energy requirement (MER) = 69,086 kilojoules (kJ), digestible energy (DE) = (11.5 ⨯ kJ ⨯ g⁻¹), DP = 8 g of digestible protein (DP) ⨯ 100 g⁻¹ of forage, dry matter intake (DMI) = 1,751 g ⨯ kg⁻¹ body mass) for a conservative estimate of spring and summer nutritional needs of deer.
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Methodology_Citation:
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Citation_Information:
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Originator: Glover, Laurel M.
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Originator: Volponi, Sabrina N.
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Originator: Royo, Alejandro A.
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Originator: Johnstone-Yellin, Tamara L.
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Publication_Date: 2023
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Title:
Effect of exclosures on the nutritional value of six species of hardwoods for white-tailed deer (Odocoileus virginianus) in the Pennsylvania Allegheny Forest- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Journal of Fish and Wildlife Management
- Other_Citation_Details:
- [In review]
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Methodology_Citation:
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Citation_Information:
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Originator: Bernes, Claes
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Originator: Macura, Biljana
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Originator: Jonsson, Bengt G.
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Originator: Junninen, Kaisa
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Originator: Müller, Jörg
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Originator: Sandström, Jennie
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Originator: Lõhmus, Asko
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Originator: Macdonald, Ellen
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Publication_Date: 2018
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Title:
Manipulating ungulate herbivory in temperate and boreal forests: effects on vegetation and invertebrates. A systematic review- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Environmental Evidence
- Issue_Identification: 7: 13
- Online_Linkage: https://doi.org/10.1186/s13750-018-0125-3
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Methodology_Citation:
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Citation_Information:
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Originator: Cook, Rachel C.
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Originator: Shipley, Lisa A.
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Originator: Cook, John G.
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Originator: Camp, Meghan J.
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Originator: Monzingo, Deborah S.
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Originator: Robatcek, Sierra L.
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Originator: Berry, Stephanie L.
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Originator: Hull, Iver T.
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Originator: Woodrow L. Myers
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Originator: Denryter, Kristin
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Originator: Long, Ryan A.
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Publication_Date: 2022
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Title:
Sequential detergent fiber assay results used for nutritional ecology research: Evidence of bias since 2012- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Wildlife Society Bulletin
- Issue_Identification: 46: e1348
- Online_Linkage: https://doi.org/10.1002/wsb.1348
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Methodology_Citation:
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Citation_Information:
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Originator: Goering, H.K.
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Originator: Van Soest, Peter J.
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Publication_Date: 1970
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Title:
Forage fiber analysis: Apparatus, reagents, procedures and some applications- Geospatial_Data_Presentation_Form: document
- Series_Information:
- Series_Name: Agricultural Handbook
- Issue_Identification: 379
- Publication_Information:
- Publication_Place: Washington DC
- Publisher: U.S. Department of Agriculture, Agricultural Research Service
- Other_Citation_Details:
- 20 p.
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Methodology_Citation:
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Citation_Information:
-
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Originator: Hanley, Thomas A.
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Originator: Spalinger, Donald E.
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Originator: Mock, Kenrick J.
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Originator: Weaver, Oran L.
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Originator: Harris, Grant M.
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Publication_Date: 2012
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Title:
Forage resource evaluation system for habitat deer: an interactive deer habitat model- Geospatial_Data_Presentation_Form: document
- Series_Information:
- Series_Name: General Technical Report
- Issue_Identification: PNW-GTR-858
- Publication_Information:
- Publication_Place: Portland, OR
- Publisher: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station
- Other_Citation_Details:
- 64 p.
- Online_Linkage: https://doi.org/10.2737/PNW-GTR-858
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Methodology_Citation:
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Citation_Information:
-
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Originator: Martin, Joan Stadler
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Originator: Martin, Michael M.
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Publication_Date: 1982
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Title:
Tannin assays in ecological studies: lack of correlation between phenolics, proanthocyanidins and protein-precipitating constituents in mature foliage of six oak species- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Oecologia
- Issue_Identification: 54(2): 205-211
- Online_Linkage: https://doi.org/10.1007/bf00378394
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Methodology_Citation:
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Citation_Information:
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Originator: Morgan, Quinn
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Originator: Johnstone-Yellin, Tamara L.
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Originator: Pinchot, Cornelia C.
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Originator: Peters, Matthew
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Originator: Royo, Alejandro A.
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Publication_Date: 2019
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Title:
Partitioning and predicting forage biomass from total aboveground biomass of regenerating tree species using dimensional analyses- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Canadian Journal of Forest Research
- Issue_Identification: 49(3): 309-316
- Online_Linkage: https://doi.org/10.1139/cjfr-2018-0119
- Online_Linkage: https://www.fs.usda.gov/research/treesearch/57697
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Methodology_Citation:
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Citation_Information:
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Originator: Robbins, Charles T.
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Originator: Mole, S.
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Originator: Hagerman, A.E.
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Originator: Hanley, T.A.
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Publication_Date: 1987
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Title:
Role of tannins in defending plants against ruminants: reduction in dry matter digestion?- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Ecology
- Issue_Identification: 68(8): 1606-1615
- Online_Linkage: https://doi.org/10.2307/1939852
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Methodology_Citation:
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Citation_Information:
-
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Originator: Robbins, Charles T.
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Originator: Hanley, T.A.
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Originator: Hagerman, A.E.
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Originator: Hjeljord, O.
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Originator: Baker, D.L.
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Originator: Schwartz, C.C.
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Originator: Mautz, W.W.
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Publication_Date: 1987
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Title:
Role of tannins in defending plants against ruminants: reduction in protein availability- Geospatial_Data_Presentation_Form: journal article
- Series_Information:
- Series_Name: Ecology
- Issue_Identification: 68(1): 98-107
- Online_Linkage: https://doi.org/10.2307/1938809
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Methodology_Citation:
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Citation_Information:
-
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Originator: Robbins, Charles T.
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Publication_Date: 1993
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Title:
Wildlife Feeding and Nutrition- Edition: 2nd edition
- Geospatial_Data_Presentation_Form: book chapter
- Publication_Information:
- Publication_Place: New York, NY
- Publisher: Academic Press
- Online_Linkage: https://doi.org/10.1016/C2013-0-11381-5
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Process_Step:
-
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Process_Description:
- For the purposes of the analyses reported in the manuscript (Glover et al. in review), we averaged all samples obtained at the quadrat (N = 15 per plot) or transect (N = 3 per plot) to an overall estimate for each browsing treatment (i.e., fenced versus unfenced control plot) at each site so as to avoid pseudo-replication.
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Process_Date: Unknown
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Spatial_Reference_Information:
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Horizontal_Coordinate_System_Definition:
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Planar:
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Grid_Coordinate_System:
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Grid_Coordinate_System_Name: Universal Transverse Mercator
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Universal_Transverse_Mercator:
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UTM_Zone_Number: 18
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Transverse_Mercator:
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Scale_Factor_at_Central_Meridian: 0.9996
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Longitude_of_Central_Meridian: -75
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Latitude_of_Projection_Origin: 0
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False_Easting: 500000
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False_Northing: 0
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Planar_Coordinate_Information:
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Planar_Coordinate_Encoding_Method: Coordinate Pair
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Coordinate_Representation:
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Abscissa_Resolution: 1
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Ordinate_Resolution: 1.00
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Planar_Distance_Units: Meters
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Planar:
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Grid_Coordinate_System:
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Grid_Coordinate_System_Name: Universal Transverse Mercator
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Universal_Transverse_Mercator:
-
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UTM_Zone_Number: 17
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Transverse_Mercator:
-
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Scale_Factor_at_Central_Meridian: 0.9996
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Longitude_of_Central_Meridian: -81
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Latitude_of_Projection_Origin: 0
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False_Easting: 500000
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False_Northing: 0
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Planar_Coordinate_Information:
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Planar_Coordinate_Encoding_Method: Coordinate Pair
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Coordinate_Representation:
-
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Abscissa_Resolution: 1
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Ordinate_Resolution: 1
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Planar_Distance_Units: Meters
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Geodetic_Model:
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Horizontal_Datum_Name: North American Datum of 1983
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Ellipsoid_Name: Geodetic Reference System 80
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Semi-major_Axis: 6378137.0000
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Denominator_of_Flattening_Ratio: 298.25722210
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Entity_and_Attribute_Information:
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Overview_Description:
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Entity_and_Attribute_Overview:
- Below you will find a list and description of the files included in this data publication.
VARIABLE DESCRIPTION FILE (1)
1. \Data\_variable_descriptions.csv: Comma-separated values (CSV) file containing a list and description of variables found in all data files. (A description of these variables is also provided in the metadata below.)
Columns include:
Filename = Name of data file
Variable = Name of variable
Units = Units (if applicable)
Precision = Precision (if applicable)
Description = Description of variable
DATA FILES (3)
1. \Data\allegheny_biomass_deerdays.csv: CSV file containing total browsable biomass and estimated nutritional carrying capacity (i.e., Deer days per hectare) based on six dominant regenerating hardwood species (Acer rubrum, Fagus grandifolia, Fraxinus americana, Betula sp., Prunus pensylvanica, and P. serotina) for sixteen regenerating Allegheny hardwood forest sites in northwestern Pennsylvania. Data are provided as averages by treatment (Fence and Control).
Variables include:
Site = Name of experimental site
Julian Day = Julian date of the sample collection in 2017 (YYDDD)
Treatment = Browsing treatment (Fence, Control [i.e., unfenced])
BB_All = Total browse biomass in grams (stems + leaves) for all species
DD_ha_All = Deer Days per hectare calculated from the FRESH model (Hanley et al. 2012) calibrated using one lactating deer with one fawn
BB_PRPE2 = Total browse biomass in grams (stems + leaves) for just Prunus pensylvanica (PRPE2)
DD_ha_PRPE2 = Deer Days per hectare calculated from the FRESH model (Hanley et al. 2012) estimated using only Prunus pensylvanica data and calibrated using one lactating deer with one fawn
2. \Data\allegheny_nutrition.csv: CSV file containing browsable biomass for both stem and leaf tissue as well as average nutritional quality data (Neutral Detergent Fiber [NDF], Dry Matter Digestibility [DMD], and Digestible Protein [DP]) for sixteen regenerating Allegheny hardwood forest sites in northwestern Pennsylvania. Data are provided by treatment (Fence and Control) and species, for six dominant regenerating hardwood species (Acer rubrum, Fagus grandifolia, Fraxinus americana, Betula sp., Prunus pensylvanica, and P. serotina).
Variables include:
Site = Name of experimental site
Julian Day = Julian date of the sample collection in 2017 (YYDDD)
Biomass = Whether data represent browsable biomass (see Morgan et al. 2019) of either leaf or stem tissue (Leaf, Stem)
Treatment = Browsing treatment (Fence, Control [i.e., unfenced])
Species = USDA Plants Database (https://plants.usda.gov/home) symbol for species in the study
ACRU = red maple
BETUL = birch
FAGR = American beech
FRAM2 = white ash
PRPE2 = pin cherry
PRSE2 = black cherry
Ave_NDF = Average Neutral Detergent Fiber (%)
Ave_DMD = Average Dry Matter Digestibility (%)
Ave_DP = Average Digestible Protein (%) (Tannins, when present, reduces the amount of crude protein available to deer and can result in negative values for digestible protein.)
3. \Data\allegheny_site_info.csv: CSV file containing the UTM coordinates and elevations of all 16 study sites.
Variables include:
Site = Name of experimental site
UTM Zone = UTM zone number and latitude band
Easting = UTM longitude in meters
Northing = UTM latitude in meters
Elevation_m = Elevation in meters
SUPPLEMENTAL FILES (1)
1. \Supplements\allegheny_site_map.pdf: Portable Document Format file containing a map of the Commonwealth of Pennsylvania showing the geographic location of all 16 study sites.
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Entity_and_Attribute_Detail_Citation:
- Glover, Laurel M.; Volponi, Sabrina N.; Royo, Alejandro A.; Johnstone-Yellin, Tamara L. [In review]. Effect of exclosures on the nutritional value of six species of hardwoods for white-tailed deer (Odocoileus virginianus) in the Pennsylvania Allegheny Forest. Journal of Fish and Wildlife Management.
Hanley, Thomas A.; Spalinger, Donald E.; Mock, Kenrick J.; Weaver, Oran L.; Harris, Grant M. 2012. Forage resource evaluation system for habitat deer: an interactive deer habitat model. General Technical Report. PNW-GTR-858. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 64 p. https://doi.org/10.2737/PNW-GTR-858
Morgan, Quinn; Johnstone-Yellin, Tamara L.; Pinchot, Cornelia C.; Peters, Matthew; Royo, Alejandro A. 2019. Partitioning and predicting forage biomass from total aboveground biomass of regenerating tree species using dimensional analyses. Canadian Journal of Forest Research. 49(3): 309-316. https://doi.org/10.1139/cjfr-2018-0119 and https://www.fs.usda.gov/research/treesearch/57697
USDA, NRCS. 2023. The PLANTS Database (http://plants.usda.gov, 07/10/2023). National Plant Data Team, Greensboro, NC USA.
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Distribution_Information:
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Distributor:
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Contact_Information:
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Contact_Organization_Primary:
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Contact_Organization: USDA Forest Service, Research and Development
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Contact_Position: Research Data Archivist
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Contact_Address:
-
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Address_Type: mailing and physical
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Address: 240 West Prospect Road
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City: Fort Collins
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State_or_Province: CO
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Postal_Code: 80526
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Country: USA
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Contact_Voice_Telephone: see Contact Instructions
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Contact Instructions: This contact information was current as of October 2023. For current information see Contact Us page on: https://doi.org/10.2737/RDS.
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Resource_Description: RDS-2023-0058
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Distribution_Liability:
- Metadata documents have been reviewed for accuracy and completeness. Unless otherwise stated, all data and related materials are considered to satisfy the quality standards relative to the purpose for which the data were collected. However, neither the author, the Archive, nor any part of the federal government can assure the reliability or suitability of these data for a particular purpose. The act of distribution shall not constitute any such warranty, and no responsibility is assumed for a user's application of these data or related materials.
The metadata, data, or related materials may be updated without notification. If a user believes errors are present in the metadata, data or related materials, please use the information in (1) Identification Information: Point of Contact, (2) Metadata Reference: Metadata Contact, or (3) Distribution Information: Distributor to notify the author or the Archive of the issues.
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Standard_Order_Process:
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Digital_Form:
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Digital_Transfer_Information:
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Format_Name: CSV
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Format_Version_Number: see Format Specification
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Format_Specification:
- Comma-separated values file
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Digital_Transfer_Option:
-
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Online_Option:
-
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Computer_Contact_Information:
-
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Network_Address:
-
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Network_Resource_Name:
https://doi.org/10.2737/RDS-2023-0058
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Digital_Form:
-
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Digital_Transfer_Information:
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Format_Name: PDF
-
Format_Version_Number: see Format Specification
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Format_Specification:
- Portable Document Format file
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Digital_Transfer_Option:
-
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Online_Option:
-
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Computer_Contact_Information:
-
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Network_Address:
-
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Network_Resource_Name:
https://doi.org/10.2737/RDS-2023-0058
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Fees: None
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Metadata_Reference_Information:
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Metadata_Date: 20231024
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Metadata_Contact:
-
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Contact_Information:
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Contact_Organization_Primary:
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Contact_Organization: USDA Forest Service, Northern Research Station
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Contact_Person: Alejandro R. Royo
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Contact_Position: Research Ecologist
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Contact_Address:
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Address_Type: mailing and physical
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Address: Forestry Sciences Laboratory
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Address: 335 National Forge Road
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City: Irvine
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State_or_Province: PA
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Postal_Code: 16329
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Country: USA
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Contact_Voice_Telephone: 814-516-5910
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Contact_Electronic_Mail_Address:
alejandro.royodesedas@usda.gov
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Contact Instructions: This contact information was current as of original publication date. For current information see Contact Us page on: https://doi.org/10.2737/RDS.
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Metadata_Standard_Name: FGDC Biological Data Profile of the Content Standard for Digital Geospatial Metadata
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Metadata_Standard_Version: FGDC-STD-001.1-1999
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