Foliar metabolism and physiology of tulip poplar, black cherry, and sugar maple growing in three different soil series, each with different taxonomic characteristics and chemistry, in the Monongahela National Forest, West Virginia, USA

Metadata:

Identification_Information:
Citation:
Citation_Information:
Originator: Minocha, Rakesh
Originator: Connolly, Stephanie J.
Originator: Long, Stephanie
Publication_Date: 2024
Title:
Foliar metabolism and physiology of tulip poplar, black cherry, and sugar maple growing in three different soil series, each with different taxonomic characteristics and chemistry, in the Monongahela National Forest, West Virginia, USA
Geospatial_Data_Presentation_Form: tabular digital data
Publication_Information:
Publication_Place: Fort Collins, CO
Publisher: Forest Service Research Data Archive
Online_Linkage: https://doi.org/10.2737/RDS-2024-0078
Description:
Abstract:
The purpose of this study was to compare the foliar metabolism and physiology of tulip poplar (Liriodendron tulipifera L.), black cherry (Prunus serotina Ehrh.), and sugar maple (Acer saccharum Marsh.) growing in three soil series, with different taxonomic characteristics and chemistry, all from sites located within the Desert Branch Watershed in the Monongahela National Forest (MNF), West Virginia, USA. In the growing season of 2003, soil samples were collected from nine sites in the Desert Branch Watershed in the MNF. At each site, a soil pit was hand excavated to various depths, and samples of O, and two to four distinct layers from the A, B and C horizons (where found) were collected. Samples were analyzed separately. Data include soil taxonomy characteristics, extrapolated bulk density, soil pH, % organic matter, total nitrogen (N) and carbon (C), exchangeable elements, exchangeable acidity, effective cation exchange capacity (ECEC), and plant available calcium (Ca) and aluminum (Al) extracted in strontium chloride (SrCl₂) all determined by pH meter, C/N Combustion Elemental Analyzer, potentiometric titration and Inductively Coupled Plasma Optical Emission Spectrophotometer (ICP-OES). Within the same time frame, foliage from 10 randomly chosen tulip poplar (TP), black cherry (BC), and sugar maple (SM) was collected from the same nine sites (two of the nine sites were less than 150 feet apart and were considered to be the same for foliar sampling but separate for soil) in an area central to where corresponding soils had previously been sampled. Data include free polyamines, free amino acids, soluble ions, chlorophyll, soluble protein, total N and total elements analyzed by HPLC, ICP-OES, spectrophotometer, and a C/N Combustion Elemental Analyzer.
Purpose:
The purpose of this study was to compare foliar metabolism and physiology of tulip poplar, black cherry and sugar maple growing in three different soil series within the Desert Branch Watershed in the Monongahela National Forest, WV.
Time_Period_of_Content:
Time_Period_Information:
Range_of_Dates/Times:
Beginning_Date: 200306
Ending_Date: 200308
Currentness_Reference:
Observed
Status:
Progress: Complete
Maintenance_and_Update_Frequency: As needed
Spatial_Domain:
Description_of_Geographic_Extent:
The sites included in this study are located within the Monongahela National Forest (MNF) in the Allegheny Mountains of eastern West Virginia. The forest encompasses 1439 square miles, four ranger districts and eight U.S. Wilderness areas, and is utilized for timber harvesting, livestock grazing, mineral extraction, drinking water and recreational activities. All nine sites lie within the Desert Branch Watershed in Nicholas County, between 38.242567 and 38.237383 latitude, and -80.494727 and -80.482217 longitude, in plant hardiness zone 6a. According to the Köppen climate matrix this area is classified as humid continental-subtype warm summer (Dfb). Annual precipitation is between 42-45 inches. The MNF falls within the Eastern Allegheny Plateau and Mountains physiographic region. This region consists of alternating beds of sandstone, limestone, coal, and shale with few distinct folds and faults along the southeastern edge in West Virginia; bedrock units are Cambrian. Dominant soil orders are Inceptisols and Ultisols. Predominant soil temperature regimes are mesic or frigid with an udic soil moisture regime. Soils in the area include fragiudults formed in colluvium on footslopes and alluvial fans, hapludults formed in residuum and/or till on hills and ridges and fragiudepts at high elevations. Elevation of these sites ranged from 853 to 1029 meters. The MNF is considered to be an area of ecological importance that is biologically complex. Much of its diversity is attributed to different patterns of precipitation resulting from wide variations in elevation. Throughout the forest approximately 75 different tree species have been identified, though the sites in this study were mostly covered by northern hardwoods.
Bounding_Coordinates:
West_Bounding_Coordinate: -80.49473
East_Bounding_Coordinate: -80.48222
North_Bounding_Coordinate: 38.24257
South_Bounding_Coordinate: 38.23738
Bounding_Altitudes:
Altitude_Minimum: 853
Altitude_Maximum: 1029
Altitude_Distance_Units: meters
Keywords:
Theme:
Theme_Keyword_Thesaurus: ISO 19115 Topic Category
Theme_Keyword: biota
Theme_Keyword: environment
Theme:
Theme_Keyword_Thesaurus: National Research & Development Taxonomy
Theme_Keyword: Ecology, Ecosystems, & Environment
Theme_Keyword: Plant ecology
Theme_Keyword: Soil
Theme_Keyword: Forest & Plant Health
Theme_Keyword: Botany
Theme:
Theme_Keyword_Thesaurus: None
Theme_Keyword: polyamines
Theme_Keyword: amino acids
Theme_Keyword: exchangeable ions
Theme_Keyword: chlorophyll
Theme_Keyword: soluble protein
Theme_Keyword: physiology
Theme_Keyword: metabolism
Theme_Keyword: nutrients
Theme_Keyword: soil taxonomic characteristics
Theme_Keyword: soil chemistry
Place:
Place_Keyword_Thesaurus: None
Place_Keyword: West Virginia
Place_Keyword: Allegheny Mountains
Place_Keyword: Monongahela National Forest
Place_Keyword: Nicholas County
Place_Keyword: Desert Branch Watershed
Taxonomy:
Keywords/Taxon:
Taxonomic_Keyword_Thesaurus:
None
Taxonomic_Keywords: multiple species
Taxonomic_Keywords: plants
Taxonomic_Keywords: vegetation
Taxonomic_Keywords: trees
Taxonomic_Keywords: Acer saccharum
Taxonomic_Keywords: sugar maple
Taxonomic_Keywords: Liriodendron tulipifera
Taxonomic_Keywords: tulip poplar
Taxonomic_Keywords: Prunus serotina
Taxonomic_Keywords: black cherry
Taxonomic_System:
Classification_System/Authority:
Classification_System_Citation:
Citation_Information:
Originator: ITIS
Publication_Date: 2024
Title:
Integrated Taxonomic Information System
Geospatial_Data_Presentation_Form: on-line database
Other_Citation_Details:
Retrieved [July, 18, 2024]; CC0: https://creativecommons.org/publicdomain/zero/1.0/legalcode
Online_Linkage: https://www.itis.gov
Online_Linkage: https://doi.org/10.5066/F7KH0KBK
Taxonomic_Procedures:
Taxonomic_Classification:
Taxon_Rank_Name: Kingdom
Taxon_Rank_Value: Plantae
Applicable_Common_Name: plantes
Applicable_Common_Name: Planta
Applicable_Common_Name: Vegetal
Applicable_Common_Name: plants
Taxonomic_Classification:
Taxon_Rank_Name: Subkingdom
Taxon_Rank_Value: Viridiplantae
Applicable_Common_Name: green plants
Taxonomic_Classification:
Taxon_Rank_Name: Infrakingdom
Taxon_Rank_Value: Streptophyta
Applicable_Common_Name: land plants
Taxonomic_Classification:
Taxon_Rank_Name: Superdivision
Taxon_Rank_Value: Embryophyta
Taxonomic_Classification:
Taxon_Rank_Name: Division
Taxon_Rank_Value: Tracheophyta
Applicable_Common_Name: vascular plants
Applicable_Common_Name: tracheophytes
Taxonomic_Classification:
Taxon_Rank_Name: Subdivision
Taxon_Rank_Value: Spermatophytina
Applicable_Common_Name: spermatophytes
Applicable_Common_Name: seed plants
Applicable_Common_Name: phanérogames
Taxonomic_Classification:
Taxon_Rank_Name: Class
Taxon_Rank_Value: Magnoliopsida
Taxonomic_Classification:
Taxon_Rank_Name: Superorder
Taxon_Rank_Value: Magnolianae
Taxonomic_Classification:
Taxon_Rank_Name: Order
Taxon_Rank_Value: Magnoliales
Taxonomic_Classification:
Taxon_Rank_Name: Family
Taxon_Rank_Value: Magnoliaceae
Applicable_Common_Name: magnolias
Taxonomic_Classification:
Taxon_Rank_Name: Genus
Taxon_Rank_Value: Liriodendron
Applicable_Common_Name: tuliptree
Taxonomic_Classification:
Taxon_Rank_Name: Species
Taxon_Rank_Value: Liriodendron tulipifera
Applicable_Common_Name: yellow poplar
Applicable_Common_Name: tulip poplar
Applicable_Common_Name: yellow-poplar
Applicable_Common_Name: tuliptree
Applicable_Common_Name: bois-jaune
Applicable_Common_Name: tulip-poplar
Taxonomic_Classification:
Taxon_Rank_Name: Superorder
Taxon_Rank_Value: Rosanae
Taxonomic_Classification:
Taxon_Rank_Name: Order
Taxon_Rank_Value: Rosales
Taxonomic_Classification:
Taxon_Rank_Name: Family
Taxon_Rank_Value: Rosaceae
Applicable_Common_Name: roses
Taxonomic_Classification:
Taxon_Rank_Name: Genus
Taxon_Rank_Value: Prunus
Applicable_Common_Name: chokecherry
Applicable_Common_Name: plum
Taxonomic_Classification:
Taxon_Rank_Name: Species
Taxon_Rank_Value: Prunus serotina
Applicable_Common_Name: black chokecherry
Applicable_Common_Name: black cherry
Taxonomic_Classification:
Taxon_Rank_Name: Order
Taxon_Rank_Value: Sapindales
Taxonomic_Classification:
Taxon_Rank_Name: Family
Taxon_Rank_Value: Sapindaceae
Applicable_Common_Name: soapberries
Taxonomic_Classification:
Taxon_Rank_Name: Genus
Taxon_Rank_Value: Acer
Applicable_Common_Name: maples
Taxonomic_Classification:
Taxon_Rank_Name: Species
Taxon_Rank_Value: Acer saccharum
Applicable_Common_Name: sugar maple
Access_Constraints: None
Use_Constraints:
These data were collected using funding from the U.S. Government and can be used without additional permissions or fees. If you use these data in a publication, presentation, or other research product please use the following citation:

Minocha, Rakesh; Connolly, Stephanie J.; Long, Stephanie. 2024. Foliar metabolism and physiology of tulip poplar, black cherry, and sugar maple growing in three different soil series, each with different taxonomic characteristics and chemistry, in the Monongahela National Forest, West Virginia, USA. Fort Collins, CO: Forest Service Research Data Archive. https://doi.org/10.2737/RDS-2024-0078
Point_of_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: USDA Forest Service, Northern Research Station
Contact_Person: Stephanie Long
Contact_Position: Biological Technician
Contact_Address:
Address_Type: mailing and physical
Address: 271 Mast Road
City: Durham
State_or_Province: NH
Postal_Code: 03824
Country: USA
Contact_Voice_Telephone: 603-868-7623 or 7622
Contact_Electronic_Mail_Address: stephanie.long2@usda.gov
Contact Instructions: This contact information was current as of original publication date. For current information see Contact Us page on: https://doi.org/10.2737/RDS.
Data_Set_Credit:
Funding for this study was provided by the USDA Forest Service, Northern Research Station.


Author Information:

Rakesh Minocha
USDA Forest Service, Northern Research Station
http://orcid.org/0000-0002-4055-5137

Stephanie J. Connolly
USDA Forest Service, Northern Research Station

Stephanie Long
USDA Forest Service, Northern Research Station
https://orcid.org/0000-0001-6515-2126
Analytical_Tool:
Analytical_Tool_Description:
TotalChrom (version 6.2.1) (PerkinElmer Inc., Waltham, MA, USA). Liquid chromatography (HPLC) control and data processing software.

Exclusive to PerkinElmer Inc., Life and Analytical Sciences, Shelton, CT, USA; 2002
Tool_Access_Information:
Online_Linkage: https://www.perkinelmer.com/content/relatedmaterials/brochures/bro_totalchromworkstation.pdf
Online_Linkage: https://www.perkinelmer.com/CMSResources/Images/46-74577MAN_TotalChromWorkstationVolume1.pdf
Tool_Access_Instructions:
see website
Tool_Citation:
Citation_Information:
Originator: PerkinElmer Inc.
Publication_Date: 2002
Title:
TotalChrom: Liquid chromatography (HPLC) control and data processing software
Edition: version 6.2.1
Geospatial_Data_Presentation_Form: software
Publication_Information:
Publication_Place: Shelton, CT
Publisher: PerkinElmer Inc., Life and Analytical Sciences
Online_Linkage: https://www.perkinelmer.com/content/relatedmaterials/brochures/bro_totalchromworkstation.pdf
Online_Linkage: https://www.perkinelmer.com/CMSResources/Images/46-74577MAN_TotalChromWorkstationVolume1.pdf
Analytical_Tool:
Analytical_Tool_Description:
ICP Expert-VistaPro Software - Life Sciences and Chemical Analysis Software for Inductively Coupled Plasma (ICP) Optical Emission Spectrophotometer
Tool_Access_Information:
Online_Linkage: https://www.agilent.com/en/products/software-informatics/atomic-spectroscopy-data-systems/icp-expert-software-for-icp-oes
Tool_Access_Instructions:
see website
Tool_Citation:
Citation_Information:
Originator: Agilent Technologies Inc.
Publication_Date: 2010
Title:
ICP Expert-VistaPro software: life sciences and chemical analysis software for inductively coupled plasma optical emission spectrophotometer
Edition: version 4.0
Geospatial_Data_Presentation_Form: software
Publication_Information:
Publication_Place: Palo Alto, CA
Publisher: Vista CCD
Other_Citation_Details:
In May 2010 Varian Inc. was acquired by Agilent Technologies Inc., Santa Clara, CA, USA). ICP-OES control and data processing software is exclusive to Agilent Technologies Inc., Santa Clara, CA, USA.
Online_Linkage: https://www.agilent.com/en/products/software-informatics/atomic-spectroscopy-data-systems/icp-expert-software-for-icp-oes
Analytical_Tool:
Analytical_Tool_Description:
UV Solutions (version 2.0) (Hitachi Ltd., Tokyo, Japan) UV-Vis Absorption spectrophotometer control and data processing software.

Is exclusive to Hitachi High-Tech Corp., Life Science Group, Tokyo, Japan.
Tool_Access_Information:
Online_Linkage: https://www.hitachi-hightech.com/file/us/pdf/library/literature/UVSolutions-HTB-E068.pdf
Tool_Access_Instructions:
see website
Analytical_Tool:
Analytical_Tool_Description:
Analytical Laboratory and Maine Soil Testing Service Laboratory at the University of Maine completed multiple analyses of dried and sieved soil samples.

Soil analyses conducted according to the Soil Science Society of America's North American Proficiency Testing (NAPT) Program which presently resides at the University of Delaware Soil Testing Laboratory, 531 S College Avenue, 152 Townsend Hall, Newark, DE, USA 19716-2170.
Tool_Access_Information:
Online_Linkage: https://umaine.edu/soiltestinglab/
Tool_Access_Instructions:
See website
Tool_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: Analytical Laboratory and Maine Soil Testing Service Laboratory
Contact_Address:
Address_Type: mailing and physical
Address: University of Maine
Address: 5722 Deering Hall
City: Orono
State_or_Province: ME
Postal_Code: 04469
Country: USA
Contact_Voice_Telephone: 207-581-3591
Contact_Facsimile_Telephone: 207-581-3597
Contact Instructions: See website for contact instructions.
Tool_Citation:
Citation_Information:
Originator: Sims, J.T. (ed.)
Originator: Wolf, A. (ed.)
Publication_Date: 2011
Title:
Recommended soil testing procedures for the northeastern United States
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: Northeast Regional Bulletin
Issue_Identification: 493
Publication_Information:
Publication_Place: Newark, DE
Publisher: Agricultural Experiment Station, University of Delaware
Other_Citation_Details:
118 p.
Online_Linkage: https://www.udel.edu/academics/colleges/canr/cooperative-extension/fact-sheets/soil-testing-procedures-northeastern-US/
Analytical_Tool:
Analytical_Tool_Description:
Plant available Ca and Al was extracted in 0.01 M Strontium Chloride (SrCl₂) and analyzed by ICP-OES at the Agricultural Analytical Services Laboratory at The Pennsylvania State University, University Park, PA according to Joslin et al. (1988).
Tool_Access_Information:
Online_Linkage: https://agsci.psu.edu/aasl
Tool_Access_Instructions:
See website
Tool_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: Agricultural Analytical Services Lab
Contact_Address:
Address_Type: mailing and physical
Address: 720 Tower Road
City: University Park
State_or_Province: PA
Postal_Code: 16802
Country: USA
Contact_Voice_Telephone: 814-863-0841
Contact_Facsimile_Telephone: 814-863-4540
Contact_Electronic_Mail_Address: aaslab@psu.edu
Contact Instructions: See website for contact instructions.
Tool_Citation:
Citation_Information:
Originator: Joslin, J. Devereux
Originator: Wolfe, Mark H.
Publication_Date: 1988
Title:
Responses of red spruce seedlings to changes in soil aluminum in six amended forest soil horizons
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Canadian Journal of Forest Research
Issue_Identification: 18(12): 1614-1623
Online_Linkage: https://doi.org/10.1139/x88-245
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Data_Quality_Information:
Attribute_Accuracy:
Attribute_Accuracy_Report:
Total foliar elements, total N, and soil samples were analyzed at the Maine Agricultural and Forest Experiment Station (MAFES) Analytical Laboratory and Maine Soil Testing Service at the University of Maine at Orono, and the Agricultural Analytical Services Laboratory at The Pennsylvania State University, University Park, PA following all standard operating procedures (SOP) & quality assurance/quality control (QA/QC) protocols found in the Soil Science Society of America's North American Proficiency Testing (NAPT) Program which presently resides at the University of Delaware Soil Testing Laboratory, Newark, DE (More information is available online at https://umaine.edu/soiltestinglab/ and https://www.udel.edu/canr/cooperative-extension/environmental-stewardship/soil-testing/). For all samples, at least one standard reference material and a reagent blank was analyzed with every set of samples that were extracted. Analytical replicates and check standards were run intermittently within each set of samples. For all soluble ion analyses, a standard curve was repeated after every 20 samples, and check standards were run after every recalibration and after every 10 samples. For metabolic analyses, because there are no standardized samples for fresh tissue, we ran a large number of biological replicates as well as multiple analytical replicates on a randomly selected subset. Appropriate method detection limits are tested for each analytical method.
Logical_Consistency_Report:
For all analyses, standards were repeated to ensure accuracy and precision. Many analytical replicates were run for biological samples as a test for assurance and repeatability. Proper statistical analyses were applied to the raw data to check distribution and remove outliers.
Completeness_Report:
There were cases where data were not available or omitted due to human/technical error, samples were missing, outlying values were removed, etc. The data that were not available (na) were replaced with the value -888.88, and those where there was no analysis have been replaced with -999.99.

There are also a few cases where the variable 'Pedon_ID' were left as blank values because the data may be available, but it hasn't been found yet.
Lineage:
Methodology:
Methodology_Type: Field
Methodology_Description:
FIELD COLLECTION

This study involved nine sites as noted above, but two of those nine sites were less than 150 feet apart and considered to be different sites for soils (sites 8 & 9), but the same for foliar sampling (site 8/9). Sampling took place during the growing season of 2003 (soils collected in June and foliage collected in August).


SOIL SAMPLING

The sites selected for this study were all located within the Desert Branch Watershed in the MNF; they were similar in geography, topography, and forest cover, yet different in soil characteristics as based on soil maps available for that area. Once the sites were established, one corresponding soil pit per site was excavated by shovel. The soil profile was exposed from the surface down to bedrock, depths varied. Natural Resources Conservation Service (NRCS) protocols were used to describe the soil profile. Samples were then collected from the pit faces of the O, and two to four distinct layers from the A, B and C horizons (where found). Qualitative assessments of the presence and abundance of roots were made. Variations in soil horizonation resulted in different sampling schemes among sites. Four to seven discrete samples were collected from each soil pit, resulting in a total of 51. Each sample was later analyzed individually.

Soil sample information was logged into a field notebook. Samples were returned to the laboratory where they were stored appropriately before analyses.


FOLIAR SAMPLING

From eight sites (as noted above, sites 8 & 9 are considered one site here) where soils had previously been collected, foliar samples were collected from a square area no more than 20-50 meters away from each soil pit. Ten randomly selected tulip poplar (TP) from seven sites, black cherry (BC) from seven sites and sugar maple (SM) from two sites were sampled for a total of 69 TP, 70 BC, and 20 SM.

Using a shotgun, single branches were collected from sunny areas in mid to upper canopy. Visually healthy leaves were chosen. Immediately after sampling, a pool of approximately 0.5 grams (g) of leaf disks were collected using a paper punch (6.4 millimeter [mm] in diameter, major veins and areas of necrosis were excluded). Each sample was thoroughly mixed to create a homogeneous pool. Of the pooled tissue from each individual tree, two sub-samples were taken; approximately 200 milligrams (mg) fresh weight (FW) was placed in a labeled and pre-weighed 2 milliliter (ml) microfuge tube and 1 ml of 5% Perchloric acid (PCA) was added, the remainder of the leaf disks were placed into a separate labeled tube. Other intact leaves from each tree branch were collected and placed in appropriately labeled paper bags; these samples were dried and later used for total N and total elemental analyses.

Sample information of microfuge tube/bag numbers/labels and tree information was logged into a field notebook. All samples were placed on ice immediately after processing. Samples were transported on ice and then stored at -20 °Celsius (°C).
Methodology:
Methodology_Type: Lab
Methodology_Description:
LABORATORY PROCESSING OF SOIL SAMPLES

In the laboratory, soil samples were air dried and sieved through 4-mm mesh for organic horizons and 2-mm mesh for mineral horizons. Subsamples were oven-dried to enable concentrations to be expressed on a dry-mass basis. Samples were sent to the Maine Agriculture and Forest Experiment Station Analytical Laboratory and Maine Soil Testing Service at the University of Maine, Orono and the Agricultural Analytical Services Laboratory at The Pennsylvania State University, University Park for various analyses.


LABORATORY PROCESSING OF FOLIAGE SAMPLES

All foliar samples in 5% PCA were weighed using a digital scale, thawed (at room temperature [RT°] for 1 hour) and re-frozen 3 times (at -20 °C) for 4 or more hours) according to Minocha et al. (1994). Weights were recorded in a Microsoft Excel spreadsheet and sample fresh weights were calculated (in grams, by subtracting the initial weight of the empty tube and 1 to accommodate the weight of 1 ml 5% PCA from the final weight of the tube + sample + 1 ml 5% PCA). Thawed PCA extracts were centrifuged at 13,000 x g for 8 minutes. The resulting supernatant was used for analyses of PCA-soluble (free) polyamines (PA) and amino acids (AA), and inorganic elements. The other sub-samples stored at -20 °C were thawed and weighed immediately before being analyzed for chlorophyll and soluble protein. All samples were processed and analyzed individually.

Whole leaf samples were dried at 60 °C for 48 hours and then ground using a shatterbox. Samples were ground for 1 minute to produce a fine homogeneous powder that were stored in tightly capped vials until further analysis.
Methodology_Citation:
Citation_Information:
Originator: Minocha, Rakesh
Originator: Shortle, Walter C.
Originator: Long, Stephanie
Originator: Minocha, Subhash C.
Publication_Date: 1994
Title:
A rapid and reliable procedure for extraction of cellular polyamines and inorganic ions from plant tissues
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Journal of Plant Growth Regulation
Issue_Identification: 13:187-193
Online_Linkage: https://doi.org/10.1007/bf00226036
Methodology:
Methodology_Type: Lab
Methodology_Description:
ANALYTICAL LABORATORY METHODS

Processing and Quantification of Soil Chemistry:

Dried and sieved samples of soils were analyzed by the Maine Agriculture and Forest Experiment Station Analytical Laboratory and Maine Soil Testing Service at the University of Maine, Orono according to the Soil Science Society of America's North American Proficiency Testing (NAPT) Program following all on-line SOPs as listed by analysis type. Analyses included: loss on ignition (LOI) to determine % organic matter on a weight loss basis-oven dried soils were heated to 550 °C in a muffle furnace for 24 hours; soil pH measured in distilled water; total % nitrogen (N) and carbon (C) determined by combustion and C/N Elemental Analyzer; exchangeable calcium (Ca), magnesium (Mg), potassium (K), phosphorous (P), aluminum (Al), iron (Fe), manganese (Mn), and sodium (Na) were extracted in 1 normal ammonium chloride (NH₄Cl) and quantitated by Inductively Coupled Plasma Optical Emission Spectrophotometer (ICP-OES), final data expressed as milligrams per kilogram soil (mg kg⁻¹). Exchangeable acidity was extracted in 1M (Molar) potassium chloride (KCl) and measured by potentiometric titration. Effective cation exchange capacity (ECEC) was calculated by the summation of exchangeable acidity plus base cations (Ca, Mg, K, Na), both data reported as milliequivalents per 100 grams soil (meq 100 g⁻¹).

Plant available Ca and Al was extracted in 0.01 M strontium chloride (SrCl₂) and analyzed by ICP-OES at the Agricultural Analytical Services Laboratory at The Pennsylvania State University, University Park, PA according to Joslin et al (1988); data expressed as milligrams per kilogram of soil (mg kg⁻¹).

Bulk density values for these data are not measured on site but are considered to be best estimates for forest soils in this region. Data are available in the NRCS National Soil Information System (NASIS) and National Cooperative Soil Survey (NCSS) Soil Characterization databases. For all subsoil and substratum horizons, bulk density data were extrapolated from soil pits sampled in the vicinity by the NRCS in the late 1970's using the clod method (Blake et al. 1986). Bulk density of the forest floor and epipedon horizons were obtained using a relative by the elevation frame excavation method (Grossman et al. 2001), and values used for the O horizons, A horizons, AB, and BA horizons were extrapolated from work conducted by Jenkins (2002) in the Allegheny Plateau of West Virginia. Data are the proportion of the weight of soil relative to its volume, expressed on both a wet and a dry basis, as grams per centimeter cubed (g cm-³).
Methodology_Citation:
Citation_Information:
Originator: Blake, G.R.
Originator: Hartge, Karl H.
Publication_Date: 1986
Title:
Chapter 13. Bulk density
Geospatial_Data_Presentation_Form: book chapter
Series_Information:
Series_Name: Soil Science Society of America Book Series
Publication_Information:
Publisher: American Society of Agronomy, Inc. and Soil Science Society of America, Inc.
Other_Citation_Details:
pp. 363-375
Online_Linkage: https://doi.org/10.2136/sssabookser5.1.2ed.c13
Larger_Work_Citation:
Citation_Information:
Originator: Klute, Arnold (ed.)
Publication_Date: 1986
Title:
Methods of soil analysis, part 1-physical and mineralogical methods
Edition: Second Edition
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: Soil Science Society of America Book Series
Publication_Information:
Publisher: American Society of Agronomy, Inc. and Soil Science Society of America, Inc.
Online_Linkage: https://doi.org/10.2136/sssabookser5.1.2ed
Methodology_Citation:
Citation_Information:
Originator: Blume, Louis J.
Originator: Schumacher, B.A.
Originator: Schaffer, P.W.
Originator: Cappo, K.A.
Originator: Papp, M.L.
Originator: van Remortel, R.D.
Originator: Coffey, D.S.
Originator: Johnson, M.G.
Originator: Chaloud, D.J.
Publication_Date: 1990
Title:
Handbook of methods for acid deposition studies - laboratory analyses for soil chemistry
Geospatial_Data_Presentation_Form: document
Series_Information:
Issue_Identification: EPA/600/4-90/023
Publication_Information:
Publication_Place: Las Vegas, NV
Publisher: U.S. Environmental Protection Agency, Environmental Monitoring Systems laboratory
Online_Linkage: https://nepis.epa.gov/Exe/ZyPURL.cgi?Dockey=200096FB.TXT
Methodology_Citation:
Citation_Information:
Originator: Cronan, Christopher S.
Originator: Grigal, David F.
Publication_Date: 1995
Title:
Use of calcium/aluminum ratios as indicators of stress in forest ecosystems
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Journal of Environmental Quality
Issue_Identification: 24(2): 209-226
Online_Linkage: https://doi.org/10.2134/jeq1995.00472425002400020002x
Methodology_Citation:
Citation_Information:
Originator: Eckert, Donald
Originator: Sims, J. Thomas
Publication_Date: 2011
Title:
Chapter 3: Recommended soil pH and lime requirement tests
Geospatial_Data_Presentation_Form: book chapter
Other_Citation_Details:
pp. 19-26
Online_Linkage: https://www.udel.edu/content/dam/udelImages/canr/pdfs/extension/factsheets/soiltest-recs/CHAP3.pdf
Larger_Work_Citation:
Citation_Information:
Originator: Sims, J.T. (ed.)
Originator: Wolf, A. (ed.)
Publication_Date: 2011
Title:
Recommended soil testing procedures for the northeastern United States
Edition: 3rd Edition
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: Northeast Regional Bulletin
Issue_Identification: 493
Publication_Information:
Publication_Place: Newark, DE
Publisher: Agricultural Experiment Station, University of Delaware
Other_Citation_Details:
118 p.
Online_Linkage: https://www.udel.edu/academics/colleges/canr/cooperative-extension/fact-sheets/soil-testing-procedures-northeastern-US/
Methodology_Citation:
Citation_Information:
Originator: Fernandez, Ivan J.
Publication_Date: 1988
Title:
B818: Preliminary protocols for sampling and analysis of ash and sludge amended forest soils
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: Maine Agricultural Experiment Station Bulletins
Issue_Identification: 818
Publication_Information:
Publication_Place: Orono, ME
Publisher: Maine Agricultural and Forest Experiment Station
Other_Citation_Details:
pp. 1-24
Online_Linkage: https://digitalcommons.library.umaine.edu/aes_bulletin/131
Methodology_Citation:
Citation_Information:
Originator: Grossman, R.B.
Originator: Harms, D.S.
Originator: Kingsbury, D.F.
Originator: Shaw, R.K.
Originator: Jenkins, A.B.
Publication_Date: 2000
Title:
Assessment of soil organic carbon using the U.S. soil survey
Geospatial_Data_Presentation_Form: book chapter
Publication_Information:
Publication_Place: Boca Raton, FL
Publisher: CRC Press
Other_Citation_Details:
pp. 87-104
Online_Linkage: https://www.taylorfrancis.com/chapters/mono/10.1201/9781482278644-15/assessment-soil-organic-carbon-using-soil-survey-john-kimble-ronald-follett-stewart
Larger_Work_Citation:
Citation_Information:
Originator: Lal, R. (ed.)
Originator: Kimble, John M. (ed.)
Originator: Follett, Ronald F. (ed.)
Originator: Stewart, B.A. (ed.)
Publication_Date: 2000
Title:
Assessment methods for soil carbon
Geospatial_Data_Presentation_Form: book
Publication_Information:
Publication_Place: Boca Raton, FL
Publisher: CRC Press
Other_Citation_Details:
696 p.
Online_Linkage: https://doi.org/10.1201/9781482278644
Methodology_Citation:
Citation_Information:
Originator: Jenkins, Anthony B.
Publication_Date: 2002
Title:
Organic carbon and fertility of forest soils on the Allegheny Plateau of West Virginia
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: Graduate Theses, Dissertations, and Problem Reports
Issue_Identification: 1525
Publication_Information:
Publication_Place: Morgantown, WV
Publisher: West Virginia University
Online_Linkage: https://doi.org/10.33915/etd.1525
Methodology_Citation:
Citation_Information:
Originator: Joslin, J. Devereux
Originator: Wolfe, Mark H.
Publication_Date: 1988
Title:
Responses of red spruce seedlings to changes in soil aluminum in six amended forest soil horizons
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Canadian Journal of Forest Research
Issue_Identification: 18(12): 1614-1623
Online_Linkage: https://doi.org/10.1139/x88-245
Methodology_Citation:
Citation_Information:
Originator: Logan, K.A.B.
Originator: Floate, M.J.S.
Originator: Ironside, A.D.
Publication_Date: 1985
Title:
Determination of exchangeable acidity and exchangeable aluminium in hill soils. Part 1 exchangeable acidity
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Communications in Soil Science and Plant Analysis
Issue_Identification: 16(3): 301-308
Online_Linkage: https://doi.org/10.1080/00103628509367604
Methodology_Citation:
Citation_Information:
Originator: Logan, K.A.B.
Originator: Floate, M.J.S.
Originator: Ironside, A.D.
Publication_Date: 1985
Title:
Determination of exchangeable acidity and exchangeable aluminium in hill soils. Part 2 exchangeable aluminium
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Communications in Soil Science and Plant Analysis
Issue_Identification: 16(3): 309-314
Online_Linkage: https://doi.org/10.1080/00103628509367605
Methodology_Citation:
Citation_Information:
Originator: McLean, Eugene O.
Publication_Date: 1982
Title:
Chapter 12. Soil pH and lime requirement
Geospatial_Data_Presentation_Form: book chapter
Series_Information:
Series_Name: Agronomy Monographs
Publication_Information:
Publisher: American Society of Agronomy, Inc. and Soil Science Society of America, Inc.
Other_Citation_Details:
pp. 199-224
Online_Linkage: https://doi.org/10.2134/agronmonogr9.2.2ed.c9
Larger_Work_Citation:
Citation_Information:
Originator: Page, A.L. (ed.)
Publication_Date: 1982
Title:
Methods of soil analysis, part 2—chemical and microbiological properties, Agronomy Monograph 9
Edition: Second Edition
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: Agronomy Monographs
Publication_Information:
Publisher: American Society of Agronomy, Inc. and Soil Science Society of America, Inc.
Online_Linkage: https://doi.org/10.2134/agronmonogr9.2.2ed
Methodology_Citation:
Citation_Information:
Originator: National Cooperative Soil Survey
Publication_Date: Unknown
Title:
National cooperative soil survey soil characterization database
Geospatial_Data_Presentation_Form: database
Publication_Information:
Publisher: U.S. Department of Agriculture, Natural Resources Conservation Service
Other_Citation_Details:
(Accessed between 2003 and 2024)
Online_Linkage: http://ncsslabdatamart.sc.egov.usda.gov/
Methodology_Citation:
Citation_Information:
Originator: Robarge, Wayne P.
Originator: Fernandez, Ivan
Publication_Date: 1987
Title:
Quality assurance methods manual for laboratory analytical techniques
Edition: Revision 1
Geospatial_Data_Presentation_Form: document
Publication_Information:
Publication_Place: Corvallis, OR
Publisher: USDA Forest Response Program, Corvallis Environmental Research Laboratory
Online_Linkage: https://nepis.epa.gov/Exe/ZyPURL.cgi?Dockey=940030GG.TXT
Methodology_Citation:
Citation_Information:
Originator: Ross, Donald S.
Originator: Ketterings, Quirine
Publication_Date: 2011
Title:
Chapter 9: Recommended methods for determining soil cation exchange capacity
Geospatial_Data_Presentation_Form: book chapter
Other_Citation_Details:
pp. 75-86
Online_Linkage: https://www.udel.edu/content/dam/udelImages/canr/pdfs/extension/factsheets/soiltest-recs/CHAP9-2009-2018.pdf
Larger_Work_Citation:
Citation_Information:
Originator: Sims, J.T. (ed.)
Originator: Wolf, A. (ed.)
Publication_Date: 2011
Title:
Recommended soil testing procedures for the northeastern United States
Edition: 3rd Edition
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: Northeast Regional Bulletin
Issue_Identification: 493
Publication_Information:
Publication_Place: Newark, DE
Publisher: Agricultural Experiment Station, University of Delaware
Other_Citation_Details:
118 p.
Online_Linkage: https://www.udel.edu/academics/colleges/canr/cooperative-extension/fact-sheets/soil-testing-procedures-northeastern-US/
Methodology_Citation:
Citation_Information:
Originator: Soil Survey Staff
Publication_Date: Unknown
Title:
Web soil survey
Geospatial_Data_Presentation_Form: database
Publication_Information:
Publisher: U.S. Department of Agriculture, Natural Resources Conservation Service
Other_Citation_Details:
(Accessed 2003 and 2023)
Online_Linkage: https://websoilsurvey.nrcs.usda.gov/app/
Methodology_Citation:
Citation_Information:
Originator: Thomas, Grant W.
Publication_Date: 1982
Title:
Chapter 9. Exchangeable cations
Geospatial_Data_Presentation_Form: book chapter
Series_Information:
Series_Name: Agronomy Monographs
Publication_Information:
Publisher: American Society of Agronomy, Inc. and Soil Science Society of America, Inc.
Other_Citation_Details:
pp. 159-165
Online_Linkage: https://doi.org/10.2134/agronmonogr9.2.2ed.c9
Larger_Work_Citation:
Citation_Information:
Originator: Page, A.L. (ed.)
Publication_Date: 1982
Title:
Methods of soil analysis, part 2—chemical and microbiological properties, Agronomy Monograph 9
Edition: Second Edition
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: Agronomy Monographs
Publication_Information:
Publisher: American Society of Agronomy, Inc. and Soil Science Society of America, Inc.
Online_Linkage: https://doi.org/10.2134/agronmonogr9.2.2ed
Methodology_Citation:
Citation_Information:
Originator: Zimmerman, Carl F.
Originator: Keefe, Carolyn W.
Originator: Bashe, Jerry
Publication_Date: 1997
Title:
Method 440.0 determination of carbon and nitrogen in sediments and Particulates of estuarine/coastal waters using elemental analysis
Edition: Revision 1.4
Geospatial_Data_Presentation_Form: document
Series_Information:
Issue_Identification: EPA/600/R-15/009
Publication_Information:
Publication_Place: Washington D.C.
Publisher: U.S. Environmental Protection Agency
Online_Linkage: https://cfpub.epa.gov/si/si_public_record_report.cfm?Lab=NERL&dirEntryId=309418
Methodology_Citation:
Citation_Information:
Originator: USDA Natural Resources Conservation Service
Publication_Date: Unknown
Title:
National soil information system (NASIS)
Geospatial_Data_Presentation_Form: database
Publication_Information:
Publisher: U.S. Department of Agriculture, Natural Resources Conservation Service
Other_Citation_Details:
(Accessed between 2003 and 2024)
Online_Linkage: https://www.nrcs.usda.gov/resources/education-and-teaching-materials/national-soil-information-system-nasis
Methodology:
Methodology_Type: Lab
Methodology_Description:
Processing and Quantification of Free Polyamines and Amino acids by High Performance Liquid Chromatography (HPLC):

Perchloric acid soluble polyamines and amino acids were simultaneously dansylated according to Minocha and Long (2004). The derivatives were analyzed on a Series 200 Perkin Elmer (Waltham, MA) HPLC system fitted with a Phenomenex (Torrance, CA) Synergi Hydro-RP™, 4 micrometers (µm), 100 x 4.6 mm I.D. analytical column, a Phenomenex C18 SecurityGuard™, 5 µm, 4 x 3 mm I.D. cartridge guard column, and a Perkin Elmer C18, 10 µm, 33 x 4.6 mm I.D. scavenger column. Excitation and emission wavelengths were set at 340 and 510 nanometers (nm) respectively. HPLC analysis follows guidance within EPA SW-846 compendium, method 8000D. Raw data were collected and integrated using TotalChrom HPLC software (Perkin Elmer, v 6.2.1) as nmoles (nmol) per ml methanol and were converted to nmol per g FW (nmol g⁻¹ FW).
Methodology_Citation:
Citation_Information:
Originator: Minocha, Rakesh
Originator: Long, Stephanie
Publication_Date: 2004
Title:
Simultaneous separation and quantitation of amino acids and polyamines of forest tree tissues and cell cultures within a single HPLC run using dansyl derivatization
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Journal of Chromatography A
Issue_Identification: 1035(1): 63-73
Online_Linkage: https://doi.org/10.1016/j.chroma.2004.02.026
Online_Linkage: https://research.fs.usda.gov/treesearch/9417
Methodology_Citation:
Citation_Information:
Originator: U.S. EPA
Publication_Date: 2018
Title:
SW-846 Test Method 8000D: Determinative Chromatographic Separations
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: SW-846 Compendium
Issue_Identification: Revision 5
Publication_Information:
Publication_Place: Washington, DC
Publisher: United States Environmental Protection Agency
Online_Linkage: https://www.epa.gov/hw-sw846/sw-846-compendium
Online_Linkage: https://www.epa.gov/hw-sw846/sw-846-test-method-8000d-determinative-chromatographic-separations
Methodology:
Methodology_Type: Lab
Methodology_Description:
Processing and Quantification of PCA-Soluble (Exchangeable) Elements in Foliage by Inductively Coupled Plasma Optical Emission Spectrophotometer (ICP-OES):

After freezing and thawing 3 times, the 5% PCA supernatants were diluted 100X with distilled deionized water for estimation of soluble ions. PCA-soluble inorganic ions Ca, K, Mg, P, Al, Fe, Mn and zinc (Zn) were quantified using a simultaneous axial ICP-OES (Vista CCD, Varian Inc., Palo Alto, CA) and Vista Pro software (v. 4.0). ICP analysis was done in accordance with EPA SW-846 compendium, method 6010. Raw data was expressed as parts per million (ppm) and was converted to micromoles (µmol) per g FW (µmol g⁻¹ FW).
Methodology_Citation:
Citation_Information:
Originator: Minocha, Rakesh
Originator: Long, Stephanie
Originator: Thangavel, Palaniswamy
Originator: Minocha, Subhash C.
Originator: Eagar, Christopher
Originator: Driscoll, Charles T.
Publication_Date: 2010
Title:
Elevation dependent sensitivity of northern hardwoods to Ca addition at Hubbard Brook Experimental Forest, NH, USA
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Forest Ecology and Management
Issue_Identification: 260(12): 2115-2124
Online_Linkage: https://doi.org/10.1016/j.foreco.2010.09.002
Online_Linkage: https://research.fs.usda.gov/treesearch/43605
Methodology_Citation:
Citation_Information:
Originator: Minocha, Rakesh
Originator: Chamberlain, Bradley
Originator: Long, Stephanie
Originator: Turlapati, Swathi A.
Originator: Quigley, Gloria
Publication_Date: 2015
Title:
Extraction and estimation of the quantity of calcium oxalate crystals in the foliage of conifer and hardwood trees
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Tree Physiology
Issue_Identification: 35(5): 574-580
Online_Linkage: https://doi.org/10.1093/treephys/tpv031
Online_Linkage: https://research.fs.usda.gov/treesearch/48697
Methodology_Citation:
Citation_Information:
Originator: U.S. EPA
Publication_Date: 2014
Title:
SW-846 Test Method 6010D: Inductively Coupled Plasma-Atomic Emission Spectrometry
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: SW-846 Compendium
Issue_Identification: Revision 4
Publication_Information:
Publication_Place: Washington, DC
Publisher: United States Environmental Protection Agency
Online_Linkage: https://www.epa.gov/hw-sw846/sw-846-compendium
Online_Linkage: https://www.epa.gov/hw-sw846/sw-846-test-method-6010d-inductively-coupled-plasma-optical-emission-spectrometry-icp-oes
Methodology:
Methodology_Type: Lab
Methodology_Description:
Processing and Quantification of Chlorophyll by Absorption Spectrometry:

Previously frozen tissue was thawed, and 1 ml of 95% ethanol was added to approximately 7 mg of thawed foliage (exact sample weights recorded for later calculations). Samples were incubated in the dark in a 65 °C water bath for 16 hours, centrifuged at 13,000 x g for 5 minutes, and the supernatants scanned for absorbance ranging from 350 to 710 nm using a spectrophotometer (Hitachi, Tokyo, Japan) with UV Solutions software (v. 2.0). Absorbances were recorded at wavelengths of 664 and 649 and then converted to µgram (µg) per g FW (µg g⁻¹ FW) according to Lichtenthaler (1987) and Minocha et al. (2009).
Methodology_Citation:
Citation_Information:
Originator: Lichtenthaler, Hartmut K.
Publication_Date: 1987
Title:
Chlorophylls and carotenoids: Pigments of photosynthetic biomembranes
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Methods in Enzymology
Issue_Identification: 148: 350-382
Online_Linkage: https://doi.org/10.1016/0076-6879(87)48036-1
Methodology_Citation:
Citation_Information:
Originator: Minocha, Rakesh
Originator: Martinez, Gabriela
Originator: Lyons, Benjamin
Originator: Long, Stephanie
Publication_Date: 2009
Title:
Development of a standardized methodology for the quantification of total chlorophyll and carotenoids from foliage of hardwood and conifer tree species
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Canadian Journal of Forest Research
Issue_Identification: 9(4): 849-861
Online_Linkage: https://doi.org/10.1139/x09-015
Online_Linkage: https://research.fs.usda.gov/treesearch/19820
Methodology:
Methodology_Type: Lab
Methodology_Description:
Processing and Quantification of Soluble Protein by Absorption Spectrometry:

Previously frozen foliage was thawed, 0.5 ml (SM and Oaks) of extraction buffer (100 mM Tris-HCl, 20 mM MgCl₂, 10 mM NaHCO₃, 1 mM EDTA, and 10% [v/v] glycerol, pH 8.0; as found in Jones et al. [1989]) was added to approximately 50 mg fresh-frozen leaf pieces (exact sample weights recorded for later calculations). Samples were then frozen and thawed 3 times, centrifuged at 13,000 x g for 5 minutes and the resulting supernatant was used for protein analysis using Bio-Rad protein dye (Bio-Rad Laboratories, Hercules, CA) according to the Bradford (1976) assay. Raw data of absorbance recorded at wavelength 595 using a spectrophotometer (Hitachi, Tokyo, Japan) with UV Solutions software (v. 2.0) and were converted to mg per g FW (mg g⁻¹ FW).
Methodology_Citation:
Citation_Information:
Originator: Bradford, Marion M.
Publication_Date: 1976
Title:
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein–dye binding
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Analytical Biochemistry
Issue_Identification: 72(1-2): 248-254
Online_Linkage: https://doi.org/10.1016/0003-2697(76)90527-3
Methodology_Citation:
Citation_Information:
Originator: Jones, Clive G.
Originator: Hare, J.D.
Originator: Compton, Steve J.
Publication_Date: 1989
Title:
Measuring plant protein with the Bradford assay
Geospatial_Data_Presentation_Form: journal article
Series_Information:
Series_Name: Journal of Chemical Ecology
Issue_Identification: 15: 979-992
Online_Linkage: https://doi.org/10.1007/BF01015193
Methodology:
Methodology_Type: Lab
Methodology_Description:
Total nitrogen in dried, ground foliage was analyzed at the Maine Agriculture and Forest Experiment Station Analytical Laboratory and Maine Soil Testing Service at the University of Maine, Orono by combustion and a C/N Elemental Analyzer according to an adaption in the Association of Official Analytical Chemists (AOAC) Official Method 990.03. Final data was expressed as percent (%).
Methodology_Citation:
Citation_Information:
Originator: Association of Official Analytical Chemists International (AOAC)
Publication_Date: 2006
Title:
Official method 990.03. Protein (crude) in animal feed, combustion method
Edition: 18th Edition, Revision 1
Geospatial_Data_Presentation_Form: book chapter
Publication_Information:
Publication_Place: Gaithersburg, MD
Publisher: AOAC International
Other_Citation_Details:
Chapter 4. pp. 30-31.
Larger_Work_Citation:
Citation_Information:
Originator: Horwitz, William (ed.)
Originator: Latimer, George W. (ed.)
Originator: Association of Official Analytical Chemists International (AOAC)
Publication_Date: 2006
Title:
Official methods of analysis of AOAC International
Edition: 18th Edition, Revision 1
Geospatial_Data_Presentation_Form: book
Publication_Information:
Publication_Place: Gaithersburg, MD
Publisher: AOAC International
Methodology_Citation:
Citation_Information:
Originator: Watson, Maurice
Originator: Wolf, Ann
Originator: Wolf, Nancy
Publication_Date: 2003
Title:
Total nitrogen
Edition: 1st Edition
Geospatial_Data_Presentation_Form: book chapter
Publication_Information:
Publication_Place: Madison, WI
Publisher: Cooperative Extension Publishing Operations
Other_Citation_Details:
Unit 3, Chapter 3. pp. 22-24.
Larger_Work_Citation:
Citation_Information:
Originator: Peters, John B. (ed.)
Publication_Date: 2003
Title:
Recommended methods of manure analysis
Edition: 1st Edition
Geospatial_Data_Presentation_Form: document
Publication_Information:
Publication_Place: Madison, WI
Publisher: Cooperative Extension Publishing Operations
Other_Citation_Details:
62 p.
Online_Linkage: https://datcp.wi.gov/Documents/NMManureAnalysisUWEX.pdf
Methodology:
Methodology_Type: Lab
Methodology_Description:
Total elements in dried, ground foliage were analyzed at the Maine Agriculture and Forest Experiment Station Analytical Laboratory and Maine Soil Testing Service at the University of Maine, Orono. Foliar samples were first acid-digested using microwave technology with a method adapted from EPA Method 3051A. Total Ca, K, Mg, P, Al, Fe, Mn, Zn, Boron (B), and Copper (Cu) were quantified using a simultaneous axial ICP-OES with a method adapted from EPA SW-846 compendium, method 6010D. Data for Ca, K, Mg and P was expressed as percent (%). The trace elements, Al, Fe, Mn, Zn, B, and Cu were reported as milligrams per kilogram (mg kg⁻¹).
Methodology_Citation:
Citation_Information:
Originator: Kovar, John L.
Publication_Date: 2003
Title:
Methods of determination for P, K, Ca, Mg and trace elements
Edition: 1st Edition
Geospatial_Data_Presentation_Form: book chapter
Publication_Information:
Publication_Place: Madison, WI
Publisher: Cooperative Extension Publishing Operations
Other_Citation_Details:
Unit 3, Chapter 6. pp. 41-43.
Larger_Work_Citation:
Citation_Information:
Originator: Peters, John B. (ed.)
Publication_Date: 2003
Title:
Recommended methods of manure analysis
Edition: 1st Edition
Geospatial_Data_Presentation_Form: document
Publication_Information:
Publication_Place: Madison, WI
Publisher: Cooperative Extension Publishing Operations
Other_Citation_Details:
62 p.
Online_Linkage: https://datcp.wi.gov/Documents/NMManureAnalysisUWEX.pdf
Methodology_Citation:
Citation_Information:
Originator: Wolf, Ann
Originator: Watson, Maurice
Originator: Wolf, Nancy
Publication_Date: 2003
Title:
Digestion and dissolution methods for P, K, Ca, Mg and trace elements
Edition: 1st Edition
Geospatial_Data_Presentation_Form: book chapter
Publication_Information:
Publication_Place: Madison, WI
Publisher: Cooperative Extension Publishing Operations
Other_Citation_Details:
Unit 3, Chapter 5. pp. 32-35.
Larger_Work_Citation:
Citation_Information:
Originator: Peters, John B. (ed.)
Publication_Date: 2003
Title:
Recommended methods of manure analysis
Edition: 1st Edition
Geospatial_Data_Presentation_Form: document
Publication_Information:
Publication_Place: Madison, WI
Publisher: Cooperative Extension Publishing Operations
Other_Citation_Details:
62 p.
Online_Linkage: https://datcp.wi.gov/Documents/NMManureAnalysisUWEX.pdf
Methodology_Citation:
Citation_Information:
Originator: U.S. EPA
Publication_Date: 2007
Title:
Method 3051A (SW-846): Microwave Assisted Acid Digestion of Sediments, Sludges, and Oils
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: SW-846 Compendium
Issue_Identification: Revision 4
Publication_Information:
Publication_Place: Washington, DC
Publisher: United States Environmental Protection Agency
Online_Linkage: https://www.epa.gov/hw-sw846/sw-846-compendium
Online_Linkage: https://www.epa.gov/esam/us-epa-method-3051a-microwave-assisted-acid-digestion-sediments-sludges-and-oils
Methodology_Citation:
Citation_Information:
Originator: U.S. EPA
Publication_Date: 2014
Title:
SW-846 Test Method 6010D: Inductively Coupled Plasma-Atomic Emission Spectrometry
Geospatial_Data_Presentation_Form: document
Series_Information:
Series_Name: SW-846 Compendium
Issue_Identification: Revision 4
Publication_Information:
Publication_Place: Washington, DC
Publisher: United States Environmental Protection Agency
Online_Linkage: https://www.epa.gov/hw-sw846/sw-846-compendium
Online_Linkage: https://www.epa.gov/hw-sw846/sw-846-test-method-6010d-inductively-coupled-plasma-optical-emission-spectrometry-icp-oes
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Entity_and_Attribute_Information:
Overview_Description:
Entity_and_Attribute_Overview:
Below you will find a list and description of the files included in this data publication.


VARIABLE DESCRIPTION FILE (1)

1. \Data\_variable_descriptions.csv: Comma-separated values (CSV) file containing a list and description of variables found in all data files. (A description of these variables is also provided in the metadata below.)

Columns include:

Filename = name of data file
Variable = name of variable
Units = units (if applicable)
Precision = precision (if applicable)
Description = description of variable


DATA FILES (2)

1. \Data\FOLIAGE_Minocha_MNF.csv: CSV file containing metabolite/physiology data from foliage collected at nine sites within the Monongahela National Forest. Species included in one-time sampling in 2003 include black cherry, sugar maple, and tulip poplar. (NOTE: -888.88 denotes data not available (na), -999.99 denotes no analysis for that sample)

Variables include:

orig_tube = In-house label given to pre-weighed tubes linking sample data to sample information in field book

rel_tube = In-house sample identification linking sample information with analytical data

coll_date = Date sample collected: August, 2003

project = Project name: Desert Branch Watershed-Monongahela National Forest (DBW-MNF)

tissue = Type of sample collected from each site: foliage

tree_# = Assigned tree number

species_common = Common name of the tree species from which foliage was collected
black cherry
sugar maple
tulip poplar

species_scientific = Scientific name of the tree species from which foliage was collected
Prunus serotina Ehrh.
Acer saccharum Marsh.
Liriodendron tulipifera L.

site_code = Alpha-numeric code given to each collection site within the MNF (NOTE *: sites FSWV03067008 & FSWV03067009 are < 150 feet apart, they were considered to be separate sites for soil sampling, but the same for foliar sampling)
FSWV03067001
FSWV03067002
FSWV03067003
FSWV03067004
FSWV03067005
FSWV03067006
FSWV03067007
FSWV03067008/9*

GPS_coord = GPS coordinates for each collection site within the MNF (latitude and longitude in decimal degrees) (NOTE **: GPS coordinates for sites FSWV03067001/4/6 are approximate)
FSWV03067001 = 38.238851, -80.492552
FSWV03067002 = 38.238800, -80.49348
FSWV03067003 = 38.239300, -80.494217
FSWV03067004 = 38.239057, -80.494727
FSWV03067005 = 38.238683, -80.491300
FSWV03067006 = 38.238870, -80.491659
FSWV03067007 = 38.237383, -80.483567
FSWV03067008/9 = 38.240567, -80.483000/38.242567, -80.482217

site_topo_position = Topographical description as to how each site is situated in the DBW-MNF
back slope position located below a ridge
bench located at midslope
floodplain
midslope
midslope where head slope is downslope from a bench
toeslope
toeslope located above a bench at midslope of mountain

aspect = Topographical aspect of each site in the DBW-MNF: All sites are northerly facing

elevation = Elevation of each site: Ranges from 853 to 1029 meters

parent_material = Underlying geological material in which soil horizons formed for each site
FSWV03067001/2/4/6/7/8/9 = colluvium
FSWV03067003 = alluvium
FSWV03067005 = residuum

soil_temp = Soil temperature regime for each site:
FSWV03067001/2/3/4/5/6/8/9 = mesic (mean annual soil temperature ≥ 8 °Celsius [°C] < 15 °C)
FSWV03067007 = frigid (mean annual soil temperature ˃ 0 °C < 8 °C)

soil_series_2003 = Soil series for each site based on Natural Resources Conservation Service (NRCS) protocols used to describe the soil profile at the time of collection in 2003
FSWV03067001 = Ernest (inclusion)
FSWV03067002/4/8/9 = Buchanan-like
FSWV03067003 = Buchanan
FSWV03067005 = Gilpin
FSWV03067006 = Ernest-like
FSWV03067007 = Snowdog-like

WSS_soil_series_2020 = Soil series for each site using the USDA-NRCS Web Soil Survey tool (WSS) for soils mapped in that area in 2020
FSWV03067001/5/6/7 = Clifftop channery (CnE)
FSWV03067002/3/4/9 = Buchanan (BvE)
FSWV03067008 = Clifftop-Buchanan complex (CoF)

WSS_map_unit_name = Soil series description for each site from the USDA-NRCS WSS for soils mapped in that area in 2020
FSWV03067001/5/6/7 = Clifftop channery silt loam, 15 to 35 percent slopes, very stony
FSWV03067002/3/4/9 = Buchanan gravelly sandy loam, moist, 15 to 35 percent slopes, extremely stony
FSWV03067008 = Clifftop-Buchanan complex, 35 to 70 percent slopes, extremely stony

Put = 5% Perchloric Acid (PCA) soluble Putrescine by High-Performance Liquid Chromatograph, fluorescence (HPLC) (Free polyamines and amino acids were extracted according to Minocha et al. (1994) and analyzed using methods found in Minocha et al. (2004) following guidance within EPA (U.S. EPA 2018: EPA SW-846 compendium, method 8000D). Units: nanomoles per gram fresh weight (nmol g⁻¹ FW)

Spd = 5% PCA soluble Spermidine by HPLC in nmol g⁻¹ FW

Spm = 5% PCA soluble Spermine by HPLC in nmol g⁻¹ FW

Spd_Put = Ratio of Spermidine:Putrescine in nmol g⁻¹ FW

Asp = 5% PCA soluble Aspartic Acid by HPLC in nmol g⁻¹ FW

Glu = 5% PCA soluble Glutamic Acid by HPLC in nmol g⁻¹ FW

Gln = 5% PCA soluble Glutamine by HPLC in nmol g⁻¹ FW

Ser+Met Minor = 5% PCA soluble Serine + Minor Methionine peak (≤ 20%) by HPLC (HPLC system was unable to separate these 2 amino acids) in nmol g⁻¹ FW

Arg = 5% PCA soluble Arginine by HPLC in nmol g⁻¹ FW

Thr = 5% PCA soluble Threonine by HPLC in nmol g⁻¹ FW

Arg+Thr = 5% PCA soluble Arginine + Threonine by HPLC (HPLC system was unable to separate these 2 amino acids) in nmol g⁻¹ FW

Gly = 5% PCA soluble Glycine by HPLC in nmol g⁻¹ FW

Pro = 5% PCA soluble Proline by HPLC in nmol g⁻¹ FW

GABA = 5% PCA soluble gamma-Aminobutyric Acid by HPLC in nmol g⁻¹ FW

Val = 5% PCA soluble Valine by HPLC in nmol g⁻¹ FW

Met = 5% PCA soluble Methionine by HPLC in nmol g⁻¹ FW

Ile = 5% PCA soluble Isoleucine by HPLC in nmol g⁻¹ FW

Leu = 5% PCA soluble Leucine by HPLC in nmol g⁻¹ FW

Trp = 5% PCA soluble Tryptophan by HPLC in nmol g⁻¹ FW

Phe = 5% PCA soluble Phenylalanine by HPLC in nmol g⁻¹ FW

Cys+Cystine = 5% PCA soluble Cysteine + Cystine by HPLC (HPLC system was unable to separate these 2 amino acids) in nmol g⁻¹ FW

Orn = 5% PCA soluble Ornithine by HPLC in nmol g⁻¹ FW

Lys = 5% PCA soluble Lysine by HPLC in nmol g⁻¹ FW

His = 5% PCA soluble Histidine by HPLC in nmol g⁻¹ FW

Exch_Ca = 5% Perchloric Acid (PCA) soluble calcium by Inductively Coupled Plasma Optical Emission Spectrophotometer (ICP-OES) (5% Perchloric Acid soluble/exchangeable Ions were extracted and analyzed as found in Minocha et al. (2010) and in accordance with EPA (U.S. EPA 2014: EPA SW-846 compendium, method 6010). Extraction is somewhat similar to EPA method 3050 and Minocha et al. (2015) shows that 1N HCl can also be used efficiently to extract equivalent amounts of soluble ions. Units: micromoles per gram fresh weight (µmol g⁻¹ FW)

Exch_K = 5% PCA soluble potassium by ICP-OES in µmol g⁻¹ FW

Exch_Mg = 5% PCA soluble magnesium by ICP-OES in µmol g⁻¹ FW

Exch_P = 5% PCA soluble phosphorous by ICP-OES in µmol g⁻¹ FW

Exch_Mn = 5% PCA soluble manganese by ICP-OES in µmol g⁻¹ FW

Exch_Al = 5% PCA soluble aluminum by ICP-OES in µmol g⁻¹ FW

Exch_Fe = 5% PCA soluble iron by ICP-OES in µmol g⁻¹ FW

Exch_Zn = 5% PCA soluble zinc by ICP-OES in µmol g⁻¹ FW

Tot_Chl = Total chlorophyll by Ultraviolet/Visible Spectrophotometer, absorption (chlorophyll was extracted in 95% ethanol (Minocha et al. 2009) and quantified according to Lichtenthaler (1987)). Units: µmol g⁻¹ FW

Chl_a = Chlorophyll a by spectrophotometer in µmol g⁻¹ FW

Chl_b = Chlorophyll b by spectrophotometer in µmol g⁻¹ FW

Chl_ab = Ratio of chlorophyll a:b

Sol_Prot = Soluble proteins by Ultraviolet/Visible Spectrophotometer, absorption (Soluble proteins were extracted in Tris buffer as found in Jones et al. (1989) and quantified using Bio-Rad™ Protein Assay; based on Bradford Method (Bradford 1976)). Units: milligrams per gram fresh weight (mg g⁻¹ FW)

Tot_N = Total nitrogen by CHNS Combustion Elemental Analyzer with an adaption in the Association of Official Analytical Chemists (AOAC 2006: Official Method 990.03. Protein (crude) in animal feed, combustion method). Units: percentage (%)

Tot_Ca = Total calcium by ICP-OES; extracted using an adaptation of EPA (U.S. EPA 2007: EPA SW-846 compendium, method 3051A) and quantified with a method adapted from EPA (U.S. EPA 2014: SW-846 compendium, method 6010D). Units: %

Tot_K = Total potassium by ICP-OES. Units: %

Tot_Mg = Total magnesium by ICP-OES. Units: %

Tot_P = Total phosphorous by ICP-OES. Units: %

Tot_Mn = Total manganese by ICP-OES in milligrams per kilogram (mg kg⁻¹)

Tot_Al = Total aluminum by ICP-OES in mg kg⁻¹

Tot_Fe = Total iron by ICP-OES in mg kg⁻¹

Tot_Zn = Total zinc by ICP-OES in mg kg⁻¹

Tot_B = Total boron by ICP-OES in mg kg⁻¹

Tot_Cu = Total copper by ICP-OES in mg kg⁻¹



2. \Data\SOIL_Minocha_MNF.csv: CSV file containing corresponding soil characteristics and soil pit data collected from the same nine sites within the Monongahela National Forest in 2003. Soils were collected from pits hand excavated to various depths. (NOTE: -888.88 denotes data not available (na), -999.99 denotes no analysis for that sample)

Variables include:

soil_sample = In-house sample identification linking sample information with analytical data

coll_date = Date sample collected: June, 2003

project = Project name: Desert Branch Watershed-Monongahela National Forest (DBW-MNF)

site_code = Alpha-numeric code given to each collection site within the DBW in the MNF (NOTE *: sites FSWV03067008 & FSWV03067009 are < 150 feet apart, they were considered to be separate sites for soil sampling, but the same for foliar sampling)
FSWV03067001
FSWV03067002
FSWV03067003
FSWV03067004
FSWV03067005
FSWV03067006
FSWV03067007
FSWV03067008*
FSWV03067009*

GPS_coord** = GPS coordinates for each collection site within the DBW in the MNF (latitude and longitude in decimal degrees) (NOTE **: GPS coordinates for sites FSWV03067001/4/6 are approximate)
FSWV03067001 = 38.238851, -80.492552**
FSWV03067002 = 38.238800, -80.49348
FSWV03067003 = 38.239300, -80.494217
FSWV03067004 = 38.239057, -80.494727**
FSWV03067005 = 38.238683, -80.491300
FSWV03067006 = 38.238870, -80.491659**
FSWV03067007 = 38.237383, -80.483567
FSWV03067008 = 38.240567, -80.483000
FSWV03067009 = 38.242567, -80.482217

site_topo_position = Topographical description as to how each site is situated in the DBW-MNF

aspect = Topographical aspect of each site in the DBW-MNF: All sites are northerly facing

elevation = Elevation of each site: Ranges from 853 to 1029 meters

parent_material = Underlying geological material in which soil horizons formed for each site
FSWV03067001/2/4/6/7/8/9 = colluvium
FSWV03067003 = alluvium
FSWV03067005 = residuum

soil_temp = Soil temperature regime for each site
FSWV03067001/2/3/4/5/6/8/9 = mesic (mean annual soil temperature ≥ 8 °C < 15 °C)
FSWV03067007 = frigid (mean annual soil temperature ˃ 0 °C < 8 °C)

Pedon_ID = A three-dimensional unit of soil containing all horizons used to taxinomically classify soil type applied in this case to extrapolate bulk density values
79WV067010 = Buchanan
79WV067007 = Ernest
79WV067011 = Gilpin
95WV093006 = Snowdog

soil_series_2003 = Soil series for each site based on Natural Resources Conservation Service (NRCS) protocols used to describe the soil profile at the time of collection in 2003
FSWV03067001 = Ernest (inclusion)
FSWV03067002/4/8/9 = Buchanan-like
FSWV03067003 = Buchanan
FSWV03067005 = Gilpin
FSWV03067006 = Ernest-like
FSWV03067007 = Snowdog-like

WSS_soil_series_2020 = Soil series for each site using the USDA-NRCS Web Soil Survey tool (WSS) for soils mapped in that area in 2020
FSWV03067001/5/6/7 = Clifftop channery (CnE)
FSWV03067002/3/4/9 = Buchanan (BvE)
FSWV03067008 = Clifftop-Buchanan complex (CoF)

WSS_map_unit_name = Soil series description for each site from the USDA-NRCS WSS for soils mapped in that area in 2020
FSWV03067001/5/6/7 = Clifftop channery silt loam, 15 to 35 percent slopes, very stony
FSWV03067002/3/4/9 = Buchanan gravelly sandy loam, moist, 15 to 35 percent slopes, extremely stony
FSWV03067008 = Clifftop-Buchanan complex, 35 to 70 percent slopes, extremely stony

WSS_scale = Scale at which soils were identified using the USDA-NRCS WSS: 1 inch = 1000 feet

soil_horizon = Soil horizon. Numbers denote that Horizon has more than 1 distinct layer.
Master Horizons:
O = Organic, made of wholly or partially decayed plant and animal debris
A = Top soil, surface mineral layer where organic matter accumulates
B = Sub Soil, the "zone of accumulation" with lower organic matter content than topsoil
E = "Eluviated", a leached mineral horizon that lies between A & B horizons
C = Parent material of soil
Subordinate distinctions of master horizons:
g = Strong gleying
h = Illuvial accumulation of organic matter
t = Accumulation of illuviated or translocated silicate clay
w = Development of color/structure with no apparent illuvial material
x = Fragipan character of firm, brittle, very coarse prisms with some root restriction

soil_depth = Depth at which soil sample was collected. Units: centimeters (cm)

root_presence = Qualitative determination of roots by soil horizon done in the field
abundant fine and very fine
few fine, few medium
many fine, few fine, few medium
many fine, few very fine, few medium
no roots
no roots-fragipan
no roots-fragipan or dense layer of rock fragments

bulk_density_wet = Proportion of the wet weight of soil relative to its volume, a measure of soil porosity on a wet weight basis: These values were not measured on site but are extrapolated from data found in NRCS NASIS and NCSS soil databases that were collected using various methods (Blake et al. 1986; Grossman et al. 2001; Jenkins 2002). Data are considered to be best estimates for forest soils in this region. (THESE ARE EXTRAPOLATED DATA.)

bulk_density_dry = Proportion of the dry weight of soil relative to its volume, a measure of soil porosity on a dry weight basis. (THESE ARE EXTRAPOLATED DATA.)

soil_pH_water = Soil pH measured in distilled water by pH meter (Fernandez 1998; McLean 1982; Eckert et al. 2011)

LOI = Percent of organic matter measured by loss on ignition (LOI)-drying for 24 hours in a muffle furnace at 550 °C (Robarge et al. 1987)

Tot_N = Total Soil nitrogen determined by combustion and C/N Elemental Analyzer (Robarge et al. 1987; Zimmerman et al. 1997). Units: %

Tot_C = Total Soil Carbon determined by combustion and C/N Elemental Analyzer. Units: %

Exch_Ca = Soil exchangeable calcium by displacement with 1 M Ammonium chloride (NH₄Cl), quantified by Inductively Coupled Plasma Optical Emission Spectrophotometer (ICP-OES) (Robarge et al. 1987; https://www.usgs.gov/media/files/exch-cations). Units: parts per million (ppm) or milligrams per kilogram (mg kg⁻¹)

Exch_K = Soil exchangeable potassium by displacement with 1 M NH₄Cl, quantified by ICP-OES in ppm or mg kg⁻¹

Exch_Mg = Soil exchangeable magnesium by displacement with 1 M NH₄Cl, quantified by ICP-OES in ppm or mg kg⁻¹

Exch_P = Soil exchangeable phosphorous by displacement with 1 M NH₄Cl, quantified by ICP-OES in ppm or mg kg⁻¹

Exch_Al = Soil exchangeable aluminum by displacement with 1 M NH₄Cl, quantified by ICP-OES in ppm or mg kg⁻¹

Exch_Fe = Soil exchangeable iron by displacement with 1 M NH₄Cl, quantified by ICP-OES in ppm or mg kg⁻¹

Exch_Mn = Soil exchangeable manganese by displacement with 1 M NH₄Cl, quantified by ICP-OES in ppm or mg kg⁻¹

Exch_Na = Soil exchangeable sodium by displacement with 1 M NH₄Cl, quantified by ICP-OES in ppm or mg kg⁻¹

exch_acidity = Exchangeable acidity extracted in 1M Potassium chloride (KCl), measured by titration (Ross and Ketterings 2011; Thomas 1982; Logan et al. 1985a,b) Units: milliequivalent per 100 grams soil (meq 100 g⁻¹)

ECEC = Effective Cation Exchange Capacity (ECEC) calculated by the summation of milliequivalent levels of Ca, K, Mg, Na, and acidity (Ross and Ketterings 2011; Thomas 1982; Logan et al. 1985a,b) Units: meq 100 g⁻¹

Ca_SrCl2 ext = Calcium in soil considered to be plant available extracted in 0.01 M strontium chloride (SrCl₂), analyzed by ICP-OES according to Joslin et al. (1988) Units: ppm or mg kg⁻¹

Al_SrCl2 ext = Aluminum in soil considered to be plant available extracted in 0.01 M SrCl₂ analyzed by ICP-OES. Units: ppm or mg kg⁻¹

Ca:Al Ratio_SrCl2 ext = Molar ratio of calcium:aluminum in 0.01 M SrCl₂ extracts, Soil:Extract Ratio; interpretation of results based on research by Cronan et al. (1995)
Entity_and_Attribute_Detail_Citation:
Association of Official Analytical Chemists International (AOAC). 2006. Official method 990.03. Protein (crude) in animal feed, combustion method. In: Horwitz, William; Latimer, George (eds.). Official methods of analysis of AOAC International. Eighteenth Edition, Revision 1. Gaithersburg, MD: AOAC International. pp. 30-31.

Blake, G.R.; Hartge, Karl H. 1986. Chapter 13: bulk density. In: Klute, Arnold (ed.). Methods of soil analysis, part 1-physical and mineralogical methods. Second Edition. Soil Science Society of America Book Series. American Society of Agronomy, Inc. and Soil Science Society of America, Inc. pp. 363-375. https://doi.org/10.2136/sssabookser5.1.2ed.c13

Bradford, Marion M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein–dye binding. Analytical Biochemistry. 72(1-2): 248-254. https://doi.org/10.1016/0003-2697(76)90527-3

Cronan, Christopher S.; Grigal, David F. 1995. Use of calcium/aluminum ratios as indicators of stress in forest ecosystems. Journal of Environmental Quality. 24(2): 209-226. https://doi.org/10.2134/jeq1995.00472425002400020002x

Eckert, Donald; Sims, J. Thomas. 2011. Chapter 3: Recommended soil pH and lime requirement tests. In: Sims, J.T.; Wolf, A. (eds.). Recommended soil testing procedures for the northeastern United States. Third Edition. Northeast Regional Bulletin #493. Newark, DE: Agricultural Experiment Station, University of Delaware. pp. 19-26. https://www.udel.edu/content/dam/udelImages/canr/pdfs/extension/factsheets/soiltest-recs/CHAP3.pdf

Fernandez, Ivan J. 1988. Preliminary protocols for sampling and analysis of ash and sludge amended forest soils. Maine Agricultural Experiment Station Bulletins 818. Orono, ME: Maine Agricultural and Forest Experiment Station. pp. 1-24. https://digitalcommons.library.umaine.edu/aes_bulletin/131

Grossman, R.B.; Harms, D.S.; Kingsbury, D.F.; Shaw, R.K.; Jenkins, A.B. 2000. Assessment of soil organic carbon using the U.S. soil survey. In: Lal, R.; Kimble, John M; Follett, Ronald F.; Stewart, B.A. (eds.). Assessment methods for soil carbon. Boca Raton, FL: CRC Press. 696 p. https://www.taylorfrancis.com/chapters/mono/10.1201/9781482278644-15/assessment-soil-organic-carbon-using-soil-survey-john-kimble-ronald-follett-stewart

Jenkins, Anthony B. 2002. Organic carbon and fertility of forest soils on the Allegheny Plateau of West Virginia. Morgantown, WV: West Virginia University. M.S. Thesis. https://doi.org/10.33915/etd.1525

Jones, Clive G.; Hare, J.D.; Compton, Steve J. 1989. Measuring plant protein with the Bradford assay. Journal of Chemical Ecology. 15: 979-992. https://doi.org/10.1007/BF01015193

Lichtenthaler, Hartmut K. 1987. Chlorophylls and carotenoids: Pigments of photosynthetic biomembranes. Methods in Enzymology. 148: 350-382. https://doi.org/10.1016/0076-6879(87)48036-1

Logan, K.A.B.; Floate, M.J.S.; Ironside, A.D. 1985a. Determination of exchangeable acidity and exchangeable aluminium in hill soils. Part 1 exchangeable acidity. Communications in Soil Science and Plant Analysis. 16(3): 301-308. https://doi.org/10.1080/00103628509367604

Logan, K.A.B.; Floate, M.J.S.; Ironside, A.D. 1985b. Determination of exchangeable acidity and exchangeable aluminium in hill soils. Part 2 exchangeable aluminium. Communications in Soil Science and Plant Analysis. 16(3): 309-314. https://doi.org/10.1080/00103628509367605

McLean, Eugene O. 1982. Soil pH and Lime Requirements. In: Page, A.L. (ed.). Methods of soil analysis, part 2-chemical and microbiological properties, Agronomy Monograph 9. Second Edition. Agronomy Monographs. American Society of Agronomy, Inc. and Soil Science Society of America, Inc. pp. 199-224. https://doi.org/10.2134/agronmonogr9.2.2ed.c12

Minocha, Rakesh; Shortle, Walter C.; Long, Stephanie; Minocha, Subhash C. 1994. A rapid and reliable procedure for extraction of cellular polyamines and inorganic ions from plant tissues. Journal of Plant Growth Regulation. 13: 187-193. https://doi.org/10.1007/bf00226036 and https://research.fs.usda.gov/treesearch/13178

Minocha, Rakesh; Long, Stephanie. 2004. Simultaneous separation and quantitation of amino acids and polyamines of forest tree tissues and cell cultures within a single HPLC run using dansyl derivatization. Journal of Chromatography A. 1035(1): 63-73. https://doi.org/10.1016/j.chroma.2004.02.026 and https://research.fs.usda.gov/treesearch/9417

Minocha, Rakesh; Martinez, Gabriela; Lyons, Benjamin; Long, Stephanie. 2009. Development of a standardized methodology for quantifying total chlorophyll and carotenoids from foliage of hardwood and conifer tree species. Canadian Journal of Forest Research 39(4): 849-861. https://doi.org/10.1139/x09-015 and https://research.fs.usda.gov/treesearch/19820

Minocha, Rakesh; Long, Stephanie; Thangavel, Palaniswamy; Minocha, Subhash C.; Eagar, Christopher; Driscoll, Charles T. 2010. Elevation dependent sensitivity of northern hardwoods to Ca addition at Hubbard Brook Experimental Forest, NH, USA. Forest Ecology and Management. 260(12): 2115-2124. https://doi.org/10.1016/j.foreco.2010.09.002 and https://research.fs.usda.gov/treesearch/43605

Minocha, Rakesh; Chamberlain, Bradley; Long, Stephanie; Turlapati, Swathi A.; Quigley, Gloria. 2015. Extraction and estimation of the quantity of calcium oxalate crystals in the foliage of conifer and hardwood trees. Tree Physiology. 35(5): 574-580. https://doi.org/10.1093/treephys/tpv031 and https://research.fs.usda.gov/treesearch/48697

National Cooperative Soil Survey. Unknown. National cooperative soil survey soil characterization database. U.S. Department of Agriculture, Natural Resources Conservation Service. http://ncsslabdatamart.sc.egov.usda.gov/ (Accessed between 2003 and 2024)

Robarge, Wayne P.; Fernandez, Ivan J. 1987. Quality assurance methods manual for laboratory analytical techniques. Corvallis, OR: U.S. Environmental Protection Agency and USDA Forest Response Program, Corvallis Environmental Research Laboratory. https://nepis.epa.gov/Exe/ZyPURL.cgi?Dockey=940030GG.TXT

Ross, Donald S.; Ketterings, Quirine. 2011. Chapter 9: recommended methods for determining soil cation exchange capacity. In: Sims, J.T.; Wolf, A. (eds.). Recommended soil testing procedures for the northeastern United States. Third Edition. Northeast Regional Bulletin #493. Newark, DE: Agricultural Experiment Station, University of Delaware. pp. 75-86. https://www.udel.edu/content/dam/udelImages/canr/pdfs/extension/factsheets/soiltest-recs/CHAP9-2009-2018.pdf

Soil Survey Staff. Unknown. Web soil survey. U.S. Department of Agriculture, Natural Resources Conservation Service. https://websoilsurvey.nrcs.usda.gov/app/ (Accessed 2003 and 2023)

Thomas, Grant W. 1982. Chapter 9: exchangeable cations. In: Page, A.L. (ed.). Methods of soil analysis, part 2—chemical and microbiological properties, Agronomy Monograph 9. Second Edition. Agronomy Monographs. American Society of Agronomy, Inc. and Soil Science Society of America, Inc. pp. 159-165. https://doi.org/10.2134/agronmonogr9.2.2ed.c9

U.S. EPA. 2007. Method 3051A (SW-846): Microwave Assisted Acid Digestion of Sediments, Sludges, and Oils, Revision 1. Washington, D.C. https://www.epa.gov/esam/us-epa-method-3051a-microwave-assisted-acid-digestion-sediments-sludges-and-oils

U.S. EPA. 2014. SW-846 Test Method 6010D: Inductively Coupled Plasma-Atomic Emission Spectrometry, Revision 4. Washington, D.C. https://www.epa.gov/sites/default/files/2015-12/documents/6010d.pdf

U.S. EPA. 2018. SW-846 Test Method 8000D: Determinative Chromatographic Separations, Revision 5. Washington, D.C. https://www.epa.gov/sites/default/files/2015-12/documents/8000d.pdf

USDA Natural Resources Conservation Service. Unknown. National soil information system (NASIS). U.S. Department of Agriculture, Natural Resources Conservation Service. https://www.nrcs.usda.gov/resources/education-and-teaching-materials/national-soil-information-system-nasi (Accessed between 2003 and 2024)

Zimmerman, Carl F.; Keefe, Carolyn W.; Bashe, Jerry. 1997. Method 440.0 determination of carbon and nitrogen in sediments and particulates of estuarine/coastal waters using elemental analysis. EPA/600/R-15/009. Washington, D.C.: U.S. Environmental Protection Agency. https://cfpub.epa.gov/si/si_public_record_report.cfm?Lab=NERL&dirEntryId=309418
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