Andrew T. Groover

Davis, CA 95618
United States
My laboratory uses genetic and genomic tools to understand the genetic regulation of growth and development of forest trees. A major focus is determining the genes and mechanisms that regulate wood formation. Currently there are three main projects in my lab:
- We are determining the genetic and molecular mechanisms regulating wood properties important for drought tolerance in trees, in collaboration with Isabelle Henry at the UC Davis Genome Center.
- In collaboration with Vladimir Filkov at UC Davis, we are determining the transcriptional networks regulating the vascular cambium and wood formation in the model forest tree genus, Populus (funded by USDA AFRI).
- In collaboration with Luca Comai and Isabelle Henry at UC Davis, we are determining the mechanisms responsible for superior performance of Populus hybrids for bioenergy production. This research is funded by the joint DOE/USDA Plant Feedstock Genomics program, and will provide new genomic tools for poplar breeders to identify germplasm with unique genotypes and increased biomass yields, and develop techniques for creating poplar hybrids with unique combinations of chromosomal regions.
- We are investigating methods for evolution and development (evo-devo) studies of wood formation in trees. Evo-devo studies could give important insights into the evolutionary origins and diversification of woody growth, and could ultimately provide new approaches for developing applications for bioenergy, carbon sequestration, and conservation.
- University of North Carolina, Ph.D., Biology, 1997
- University of Georgia, M.S., Forest Genetics, 1991
- University of Georgia, B.S., Forest Science, 1988
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Adjunct Assistant/Associate/Full Professor, Department of Plant Biology,
University of California Davis,
2001 -
Current
-
Plant Biology Graduate Group,
University of California Davis,
2003 -
Present
-
Geneticist,
USDA Forest Service, Institute of Forest Genetics,
2000 -
Present
-
Director,
USDA Forest Service, Institute of Forest Genetics,
2003 -
2010
-
Postdoctoral Fellow,
Cold Spring Harbor Laboratory, NY,
1997 -
2000
- Editorial Advisory Board, Plants, People, Planet, 2017 - Current
- Editor, New Phytologist, 2012 - Current
- Member, American Society of Plant Biology, Current
- Member, International Association of Wood Anatomists, Current
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Arnold Arboretum of Harvard University, 2014
Arnold Arboretum of Harvard University “The next generation of research for forest tree evolution and development.” Sargent Fellowship Award
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Station Director's Honor Award, 2014
US Forest Service Pacific Southwest Research Station. Station Director’s Honor Award for Science That Makes a Difference.
- Zinkgraf, Matthew; Gerttula, Suzanne; Groover, Andrew. 2017. Transcript profiling of a novel plant meristem, the monocot cambium
- Groover, Andrew. 2017. Age-related changes in tree growth and physiology
- Henry, Isabelle M.; Zinkgraf, Matthew S.; Groover, Andrew T.; Comai, Luca. 2015. A system for dosage-based functional genomics in poplar
- Gerttula, Suzanne; Zinkgraf, Matthew S.; Muday, Gloria K.; Lewis, Daniel R.; Ibatullin, Farid M.; Brumer, Harry; Hart, Foster; Mansfield, Shawn D.; Filkov, Vladimir; Groover, Andrew. 2015. Transcriptional and Hormonal Regulation of Gravitropism of Woody Stems in Populus
- Groover, Andrew. 2016. Gravitropisms and reaction woods of forest trees - evolution, functions and mechanisms
- Groover, Andrew; Spicer, Rachel. 2010. The evolution of development of vascular cambia and secondary growth
- Rodriguez-Zaccaro, F. Daniela; Henry, Isabelle M.; Groover, Andrew. 2021. Genetic regulation of vessel morphology in Populus
- Bastiaanse, Héloïse ; Henry, Isabelle ; Tsai, Helen ; Lieberman, Meric ; Canning, Courtney ; Comai, Luca ; Groover, Andrew. 2020. A systems genetics approach to deciphering the effect of dosage variation on leaf morphology in Populus
- Cronk, Quentin C.B.; Groover, Andrew T.. 2017. Introduction: Comparative Genomics of Angiosperm Trees: A New Era of Tree Biology
- Ariani, Andrea ; Romeo, Stefania ; Groover, Andrew T.; Sebastiani, Luca. 2016. Comparative epigenomic and transcriptomic analysis of Populus roots under excess Zn
- He, Xinqiang ; Groover, Andrew T.. 2017. The genomics of wood formation in angiosperm trees
- Zinkgraf, Matthew ; Zhao, Shu‐Tang ; Canning, Courtney ; Gerttula, Suzanne ; Lu, Meng‐Zhu ; Filkov, Vladimir ; Groover, Andrew. 2020. Evolutionary network genomics of wood formation in a phylogenetic survey of angiosperm forest trees
- Groover, Andrew. 2020. Woody plant evolution: exceptional lianas reveal rules of woody growth
- Gerttula, Suzanne ; Groover, Andrew. 2017. Immunolocalization in secondary xylem of Populus
- Groover, Andrew ; Mansfield, Shawn D.. 2020. An introduction to a Virtual Issue on wood biology
- Bastiaanse, Héloïse ; Zinkgraf, Matthew ; Canning, Courtney ; Tsai, Helen ; Lieberman, Meric ; Comai, Luca ; Henry, Isabelle ; Groover, Andrew. 2019. A comprehensive genomic scan reveals gene dosage balance impacts on quantitative traits in Populus trees
- Du, Juan ; Gerttula, Suzanne ; Li, Zehua ; Zhao, Shu‐Tang ; Liu, Ying‐Li ; Liu, Yu ; Lu, Meng‐Zhu ; Groover, Andrew T.. 2020. Brassinosteroid regulation of wood formation in poplar
- Rodriguez‐Zaccaro, F. Daniela; Groover, Andrew. 2019. Wood and water: How trees modify wood development to cope with drought
- Tomescu, Alexandru M. F.; Groover, Andrew T.. 2019. Mosaic modularity: an updated perspective and research agenda for the evolution of vascular cambial growth
- Tuskan, Gerald A.; Groover, Andrew T.; Schmutz, Jeremy ; DiFazio, Stephen Paul; Myburg, Alexander ; Grattapaglia, Dario ; Smart, Lawrence B.; Yin, Tongming ; Aury, Jean-Marc ; Kremer, Antoine ; Leroy, Thibault ; Le Provost, Gregoire ; Plomion, Christophe ; Carlson, John E.; Randall, Jennifer ; Westbrook, Jared ; Grimwood, Jane ; Muchero, Wellington ; Jacobson, Daniel ; Michener, Joshua K.. 2018. Hardwood tree genomics: unlocking woody plant biology
- Zinkgraf, M; Groover, Andrew; Filkov, V.. 2018. Reconstructing gene networks of forest trees from gene expression data: toward higher resolution approaches
- Shu, Wenbo ; Zhou, Houjun ; Jiang, Cheng ; Zhao, Shutang ; Wang, Liuqiang ; Li, Quanzi ; Yang, Zhangqi ; Groover, Andrew ; Lu, Meng-Zhu. 2019. The auxin receptor TIR1 homolog (PagFBL 1) regulates adventitious rooting through interactions with Aux/IAA28 in Populus
- Zinkgraf, Matthew ; Gerttula, Suzanne ; Zhao, Shutang ; Filkov, Vladimir ; Groover, Andrew. 2018. Transcriptional and temporal response of Populus stems to gravi-stimulation
- Zinkgraf, Matthew; Liu, Lijun; Groover, Andrew; Filkov, Vladimir. 2017. Identifying gene coexpression networks underlying the dynamic regulation of wood-forming tissues in Populus under diverse environmental conditions
- Groover, Andrew ; Jansson, Stefan. 2014. Comparative and evolutionary genomics of forest trees
- Zinkgraf, Matthew S.; Haiby, K.; Lieberman, M.C.; Comai, L.; Henry, I.M.; Groover, Andrew. 2016. Creation and genomic analysis of irradiation hybrids in Populus
- Groover, Andrew. 2015. Genomic science provides new insights into the biology of forest trees
- Liu, Lijun; Zinkgraf, Matthew S.; Petzold, H. Earl; Beers, Eric P.; Filkov, Vladimir; Groover, Andrew. 2014. The Populus ARBORKNOX1 homeodomain transcription factor regulates woody growth through binding to evolutionarily conserved target genes of diverse function
- Liu, Lijun; Ramsay, Trevor; Zinkgraf, Matthew S.; Sundell, David; Street, Nathaniel Robert; Filkov, Vladimir; Groover, Andrew. 2015. A resource for characterizing genome-wide binding and putative target genes of transcription factors expressed during secondary growth and wood formation in Populus
- Kidner, Catherine; Groover, Andrew; Thomas, Daniel C.; Emelianova, Katie; Soliz-Gamboa, Claudia; Lens, Frederic. 2015. First steps in studying the origins of secondary woodiness in Begonia (Begoniaceae): combining anatomy, phylogenetics, and stem transcriptomics
- Hussey, Steven G; Mizrachi, Eshchar; Groover, Andrew; Berger, Dave K; Myburg, Alexander A. 2015. Genome-wide mapping of histone H3 lysine 4 trimethylation in Eucalyptus grandis developing xylem
- Liu, Lijun; Missirian, V.; Zinkgraf, Matthew S.; Groover, Andrew; Filkov, V.. 2014. Evaluation of experimental design and computational parameter choices affecting analyses of ChIP-seq and RNA-seq data in undomesticated poplar trees.
- Lucas, William J.; Groover, Andrew; Lichtenberger, Raffael; Furuta, Kaori; Yadav, Shri-Ram; Helariutta, Yka; He, Xin-Qiang; Fukuda, Hiroo; Kang, Julie; Brady, Siobhan M.; Patrick, John W.; Sperry, John; Yoshida, Akiko; Lopez-Millan, Ana-Flor; Grusak, Michael A.; Kachroo, Pradeep. 2013. The plant vascular system: Evolution, development and functions
- Liu, Lijun; Filkov, Vladimir; Groover, Andrew. 2013. Modeling transcriptional networks regulating secondary growth and wood formation in forest trees
- Groover, Andrew; Cronk, Quentin. 2013. From Nehemiah Grew to Genomics: the emerging field of evo-devo research for woody plants
- Ahuja, M.R.; Devey, M.E.; Groover, A.T.; Jermstad, K.D.; Neale, D.B. 1994. Mapped DNA probes from Ioblolly pine can be used for restriction fragment length polymorphism mapping in other conifers
- Lens, Federic; Cooper, Laurel; Gandolfo, Maria Alejandra; Groover, Andrew; Jaiswal, Pankaj; Lachenbruch, Barbara; Spicer, Rachel; Staton, Margaret E.; Stevenson, Dennis W.; Walls, Ramona L.; Wegrzyn, Jill. 2012. An extension of the plant ontology project supporting wood anatomy and development research
- Dosmann, Michael; Groover, Andrew. 2012. The important of living botanical collections for plant biology and the next generation of evo-devo research
- Robischon, Marcel; Du, Juan; Miura, Eriko; Groover, Andrew. 2011. The Populus Class III HD ZIP, popREVOLUTA, influences cambium initiation and patterning of woody stems
- Du, Juan; Miura, Eriko; Robischon, Marcel; Martinez, Ciera; Groover, Andrew. 2011. The Populus Class III HD ZIP transcription factor POPCORONA affects cell differentiation during secondary growth of woody stems
- Du, Juan; Groover, Andrew. 2010. Transcriptional control of secondary growth and wood formation.
- Du, Juan; Mansfield, Shawn D.; Groover, Andrew T.. 2009. The Populus homeobox gene ARBORKNOX2 regulates cell differentiation during secondary growth
- Abzhanov, A.; Extavour, C.; Groover, A.; Hodges, S.; Hoekstra, H.; Kramer, E.; Monteiro, A.. 2008. Are we there yet Tracking the development of new model systems
- Groover, Andrew T.; Pattishall, Amy; Jones, Alan M.. 2003. IAA8 expression during vascular cell differentiation
- Tuskan, G.A.; DiFazio, S.; Jansson, S.; Bohlmann, J.; Grigoriev, I.; Hellsten, U.; Putnam, N.; Ralph, S.; Rombauts, S.; Salamov, A.; Schein, J.; Sterck, L.; Aerts, A.; Bhalerao, R.R.; Bhalerao, R.P.; Blaudez, D.; Boerjan, W.; Brun, A.; Brunner, A.; Busov, V.; Campbell, M.; Carlson, J.; Chalot, M.; Chapman, J.; Chen, G.-L.; Cooper, D.; Coutinho, P.M.; Couturier, J.; Covert, S.; Cronk, Q.; Cunningham, R.; Davis, J.; Degroeve, S.; Dejardin, A.; dePamphilis, C.; Detter, J.; Dirks, B.; Dubchak, U.; Duplessis, S.; Ehlting, J.; Ellis, B.; Gendler, K.; Goodstein, D.; Gribskov, M.; Grimwood, J.; Groover, A.; Gunter, L.; Hamberger, B.; Heinze, B.; Helariutta, Y.; Henrissat, B.; Holligan, D.; Holt, R.; Huang, W.; Islam-Faridi, N.; Jones, S.; Jones-Rhoades, M.; Jorgensen, R.; Joshi, C.; Kangasjarvi, J.; Karlsson, J.; Kelleher, C.; Kirkpatrick, R.; Kirst, M.; Kohler, A.; Kalluri, U.; Larimer, F.; Leebens-Mack, J.; Leple, J.-C.; Locascio, P.; Lou, Y.; Lucas, S.; Martin, F.; Montanini, B.; Napoli, C.; Nelson, D.R.; Nelson, C.; Nieminen, K.; Nilsson, O.; Pereda, V.; Peter, G.; Philippe, R.; Pilate, G.; Poliakov, A.; Razumovskaya, J.; Richardson, P.; Rinaldi, C.; Ritland, K.; Rouze, P.; Ryaboy, D.; Schumtz, J.; Schrader, J.; Segerman, B.; Shin, H.; Siddiqui, A.; Sterky, F.; Terry, A.; Tsai, C.-J.; Uberbacher, E.; Unneberg, P.; Vahala, J.; Wall, K.; Wessler, S.; Yang, G.; Yin, T.; Douglas, C.; Marra, M.; Sandberg, G.; Van de Peer, Y.; Rokhsar, D.. 2006. The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
- Groover, Andrew T.; Fontana, Joseph R.; Arroyo, Juana M.; Yordan, Cristina; McCombie, W. Richard; Martienssen, Robert A.. 2003. Secretion Trap Tagging of Secreted and Membrane-Spanning Proteins Using Arabidopsis Gene Traps
- Groover, Andrew; Robischon, Marcel. 2006. Developmental mechanisms regulating secondary growth in woody plants
- Groover, Andrew T.. 2005. What genes make a tree a tree
- Byrne, Mary E.; Groover, Andrew T.; Fontana, Joseph R.; Martienssen, Robert A.. 2003. Phyllotactic pattern and stem cell fate are determined by the Arabidopsis homeobox gene BELLRINGER
- Busov, Victor; Fladung, Matthias; Groover, Andrew; Strauss, Steven. 2005. Insertional mutagenesis in Populus: relevance and feasibility
- Groover, Andrew; Fontana, Joseph R.; Dupper, Gayle; Ma, Caiping; Martienssen, Robert; Strauss, Steven; Meilan, Richard. 2004. Gene and enhancer trap tagging of vascular-expressed genes in poplar trees
- Groover, A.; Devey, M.; Fiddler, T.; Lee, J.; Megraw, R.; Mitchel-Olds, T.; Sherman, B.; Vujcic, S.; Williams, C.; Neale, D.. 1994. Identification of quantitative trait loci influencing wood specific gravity in an outbred pedigree of loblolly pine

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