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Genome sequences of Phytophthora enable translational plant disease management and accelerate researchAuthor(s): Niklaus J. Grünwald
Source: Canadian Journal of Plant Pathology. 34(1): 13-19
Publication Series: Scientific Journal (JRNL)
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DescriptionWhole and partial genome sequences are becoming available at an ever-increasing pace. For many plant pathogen systems, we are moving into the era of genome resequencing. The first Phytophthora genomes, P. ramorum and P. sojae, became available in 2004, followed shortly by P. infestans in 2006. Availability of whole genome sequences has provided rapid and immediate advances in several areas also resulting in many practical applications and critical new insights. Availability of comparative genome data facilitated discovery of new classes of effectors, such as the RxLR-dEER and crinkler effector families. Genome data also enabled development of molecular markers for population genomic approaches that provided critical new insights into the evolutionary history of species and clades of Phytophthora. Several select examples of advances resulting from comparative genomic approaches in a concerted effort of the Oomycete research community are reviewed. [Partially funded by USDA FS PSW agreement 11-IA-11272131-077.]
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CitationGrünwald, Niklaus J. 2012. Genome sequences of Phytophthora enable translational plant disease management and accelerate research. Canadian Journal of Plant Pathology. 34(1): 13-19.
Keywordseffector, emerging pathogens, exotic pathogens, genome analysis, Phytophthora, translational analysis
- What can availability of the Phytophthora ramorum genome do for us?
- Molecular evolution of an Avirulence Homolog (Avh) gene subfamily in Phytophthora ramorum
- Emergence of the sudden oak death pathogen Phytophthora ramorum
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