Skip to Main Content
-
Improving ITS sequence data for identification of plant pathogenic fungi
Author(s): R. Henrik Nilsson; Kevin D. Hyde; Julia Pawłowska; Martin Ryberg; Leho Tedersoo; Anders Bjørnsgard Aas; Siti A. Alias; Artur Alves; Cajsa Lisa Anderson; Alexandre Antonelli; A. Elizabeth Arnold; Barbara Bahnmann; Mohammad Bahram; Johan Bengtsson-Palme; Anna Berlin; Sara Branco; Putarak Chomnunti; Asha Dissanayake; Rein Drenkhan; Hanna Friberg; Tobias Guldberg Frøslev; Bettina Halwachs; Martin Hartmann; Beatrice Henricot; Ruvishika Jayawardena; Ari Jumpponen; Håvard Kauserud; Sonja Koskela; Tomasz Kulik; Kare Liimatainen; Björn D. Lindahl; Daniel Lindner; Jian-Kui Liu; Sajeewa Maharachchikumbura; Dimuthu Manamgoda; Svante Martinsson; Maria Alice Neves; Tuula Niskanen; Stephan Nylinder; Olinto Liparini Pereira; Danilo Batista Pinho; Teresita M. Porter; Valentin Queloz; Taavi Riit; Marisol Sánchez-García; Filipe de Sousa; Emil Stefańczyk; Mariusz Tadych; Susumu Takamatsu; Qing Tian; Dhanushka Udayanga; Martin Unterseher; Zheng Wang; Saowanee Wikee; Jiye Yan; Ellen Larsson; Karl-Henrik Larsson; Urmas Kõljalg; Kessy Abarenkov
Date: 2014
Source: Fungal Diversity
Publication Series: Scientific Journal (JRNL)
Station: Forest Products Laboratory
PDF: Download Publication (0 B)Description
Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours. These taxa often have complex and poorly understood life cycles, lack observable, discriminatory morphological characters, and may not be amenable to in vitro culturing. As a result, species identification is frequently difficult. Molecular (DNA sequence) data have emerged as crucial information for the taxonomic identification of plant pathogenic fungi, with the nuclear ribosomal internal transcribed spacer (ITS) region being the most popular marker.Publication Notes
- We recommend that you also print this page and attach it to the printout of the article, to retain the full citation information.
- This article was written and prepared by U.S. Government employees on official time, and is therefore in the public domain.
Citation
Nilsson, R. Henrik; Hyde, Kevin D.; Pawłowska, Julia; Ryberg, Martin; Tedersoo, Leho; Aas, Anders Bjørnsgard; Alias, Siti A.; Alves, Artur; Anderson, Cajsa Lisa; Antonelli, Alexandre; Arnold, A. Elizabeth; Bahnmann, Barbara; Bahram, Mohammad; Bengtsson-Palme, Johan; Berlin, Anna; Branco, Sara; Chomnunti, Putarak; Dissanayake, Asha; Drenkhan, Rein; Friberg, Hanna; Frøslev, Tobias Guldberg; Halwachs, Bettina; Hartmann, Martin; Henricot, Beatrice; Jayawardena, Ruvishika; Jumpponen, Ari; Kauserud, Håvard; Koskela, Sonja; Kulik, Tomasz; Liimatainen, Kare; Lindahl, Björn D.; Lindner, Daniel; Liu, Jian-Kui; Maharachchikumbura, Sajeewa; Manamgoda, Dimuthu; Martinsson, Svante; Neves, Maria Alice; Niskanen, Tuula; Nylinder, Stephan; Pereira, Olinto Liparini; Pinho, Danilo Batista; Porter, Teresita M.; Queloz, Valentin; Riit, Taavi; Sánchez-García, Marisol; de Sousa, Filipe; Stefańczyk, Emil; Tadych, Mariusz; Takamatsu, Susumu; Tian, Qing; Udayanga, Dhanushka; Unterseher, Martin; Wang, Zheng; Wikee, Saowanee; Yan, Jiye; Larsson, Ellen; Larsson, Karl-Henrik; Kõljalg, Urmas; Abarenkov, Kessy. 2014. Improving ITS sequence data for identification of plant pathogenic fungi. Fungal Diversity, Vol. 67(1): 9 pages.: 11-19.Cited
Keywords
Phytopathogenic fungi, Molecular identification, ITS, Taxonomy, AnnotationRelated Search
- Arsenic uptake and phytoremediation potential by arbuscular mycorrhizal fungi
- Common wood decay fungi found in the Caribbean Basin
- Multi-component biocide protects wood from fungi and insects in UC2 applications
XML: View XML
Show More
Show Fewer
https://www.fs.usda.gov/treesearch/pubs/49867