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Publication Details

Title:
Species occurrence data from the Range-Wide Bull Trout eDNA Project Data publication contains GIS data
Author(s):
Young, Michael K.; Isaak, Daniel J.; McKelvey, Kevin S.; Schwartz, Michael K.; Carim, Kellie J.; Fredenberg, Wade; Wilcox, Taylor M.; Franklin, Thomas W.; Chandler, Gwynne L.; Nagel, David E.; Parkes-Payne, Sharon L.; Horan, Dona L.; Wollrab, Sherry P.
Publication Year:
2017
How to Cite:
These species occurrence data and accompanying geospatial datasets were created using funding from the U.S. Government and can be used without additional permissions or fees. If you use these data in a publication, presentation, or other research product please use the following citation:
Young, Michael K.; Isaak, Daniel J.; McKelvey, Kevin S.; Schwartz, Michael K.; Carim, Kellie J.; Fredenberg, W.; Wilcox, Taylor M.; Franklin, T.; Chandler, Gwynne L.; Nagel, David E.; Parkes-Payne, Sharon L.; Horan, Dona L.; Wollrab, Sherry P. 2017. Species occurrence data from the Range-Wide Bull Trout eDNA Project. Fort Collins, CO: Forest Service Research Data Archive. Updated 05 June 2021. https://doi.org/10.2737/RDS-2017-0038

The USDA Forest Service makes no warranty, expressed or implied, including the warranties of merchantability and fitness for a particular purpose, nor assumes any legal liability or responsibility for the accuracy, reliability, completeness or utility of these geospatial data, or for the improper or incorrect use of these geospatial data. These geospatial data and related maps or graphics are not legal documents and are not intended to be used as such. The data and maps may not be used to determine title, ownership, legal descriptions or boundaries, legal jurisdiction, or restrictions that may be in place on either public or private land. Natural hazards may or may not be depicted on the data and maps, and land users should exercise due caution. The data are dynamic and may change over time. The user is responsible to verify the limitations of the geospatial data and to use the data accordingly.
Abstract:
These data include 2014 - 2020 eDNA field sample points indicating lab results for presence or absence of bull trout. Sample sites are spaced at a 1 kilometer interval throughout the historical range of bull trout. eDNA stream samples are collected and species presence/absence is determined by analyses at the National Genomics Center. Results are recorded in the feature attribute table of the eDNA sample site shapefile. One point feature in the shapefile was generated for each 1 kilometer sample point in the bull trout eDNA feature class. Where multiple samples were collected at a single eDNA sample site, replicate point features will occur at a single location in the shapefile.

The bull trout is an ESA-listed species with a historical range that encompasses many waters across the Northwest. Though once abundant, bull trout have declined in many locations and are at risk from a changing climate, nonnative species, and habitat degradation. Informed conservation planning relies on sound and precise information about the distribution of bull trout in thousands of streams, but gathering this information is a daunting and expensive task. To overcome this problem, we coupled 1) predictions from the range-wide, spatially precise Climate Shield model on the location of natal habitats of bull trout with 2) a sampling template for every 8-digit hydrologic unit in the historical range of bull trout, based on the probability of detecting bull trout presence using environmental DNA (eDNA) sampling (McKelvey et al. 2016). The template consists of a master set of geospatially referenced sampling locations at 1-kilometer intervals within each cold-water habitat. We also identified sampling locations at this same interval based on the U.S. Fish and Wildlife Service's (USFWS) designation of critical spawning and rearing habitat. Based on field tests of eDNA detection probabilities conducted by the National Genomics Center for Wildlife and Fish Conservation, this sampling approach will reliably determine the presence of populations of bull trout, as well as provide insights on non-spawning habitats used by adult and subadult fish. The completed bull trout eDNA survey results are available through an interactive ArcGIS Online Map. The map provides the ability to zoom in and look at an area of interest, as well as to create queries or select an area to download points as a shapefile.

Keywords:
biota; climatologyMeteorologyAtmosphere; environment; inlandWaters; Climate change; Ecology, Ecosystems, & Environment; Hydrology, watersheds, sedimentation; Forest & Plant Health; Climate effects; Invasive species; Inventory, Monitoring, & Analysis; Monitoring; Natural Resource Management & Use; Landscape management; Wildlife (or Fauna); Fish; Habitat management; eDNA; environmental DNA; bull trout; presence; population; location; status; survey; bull trout habitat; occurrence; sample; study; fish; western United States; Idaho; Montana; Washington; Oregon; Nevada
Related publications:
  • McKelvey, Kevin S.; Young, Michael K.; Knotek, W. Ladd; Carim, Kellie J.; Wilcox, Taylor M.; Padgett-Stewart, Ticha M.; Schwartz, Michael K. 2016. Sampling large geographic areas for rare species using environmental DNA: A study of bull trout Salvelinus confluentus occupancy in western Montana. Journal of Fish Biology. 88: 1215-1222. https://doi.org/10.1111/jfb.12863
  • Carim, Kellie J.; McKelvey, Kevin S.; Young, Michael K.; Wilcox, Taylor M.; Schwartz, Michael K. 2016. A protocol for collecting environmental DNA samples from streams. Gen. Tech. Rep. RMRS-GTR-355. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. 18 p. https://research.fs.usda.gov/treesearch/52466
  • Isaak, Daniel J.; Young, Michael K.; Nagel, David E.; Horan, Dona L.; Groce, Matthew C. 2015. The cold-water climate shield: Delineating refugia for preserving salmonid fishes through the 21st century. Global Change Biology. 21: 2540-2553. https://doi.org/10.1111/gcb.12879
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