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Home    Projects    The Aquatic eDNAtlas Project  The eDNAtlas Sample Results

The eDNAtlas - Results

Aquatic eDNAtlas Project eDNA Sample Results

Aquatic eDNAtlas Project eDNA Sample Results

~~~~~

click here to download the full eDNAtlas File GeoDatabase with eDNA results

 

The eDNAtlas is accessed via an interactive ArcGIS Online (AGOL) map that allows users to view and download sample site information and lab results of species occurrence for the U.S. The results are based on samples analyzed at the National Genomics Center for Wildlife and Fish Conservation (NGC) and associated with geospatial attributes created by the Boise Spatial Streams Group (BSSG).

The AGOL maps display results for all species sampled within an 8-digit USGS hydrologic unit or series of units. The map initially opens to the western or eastern project extent, but each allows users to zoom to areas of interest. Symbols indicate whether a field sample has been collected and processed at a specific location, and if the latter, whether the target species was present. Each site is assigned a unique identification code in the database to ensure that it can be tracked and matched to geospatial habitat descriptors or other attributes for subsequent analyses and reports. This functionality previously was enabled only for sample sites on flowing waters but the 6/2021 update added a "HighRes" feature class for lakes, springs, and small streams. These samples may be viewed using the species NHDPlusHR checkbox.

Western eDNAtlas Results Map | Eastern eDNAtlas Results Map

AGOL Maps User Guide | Metadata

 

Users also have the option to Download the entire ArcGIS GeoDatabase for local use. The GeoDatabase has more information than is available from the AGOL interactive maps, and enables more detailed queries, analyses, and creation of custom maps. Please refer to the individual feature class metadata in the GeoDatabase for more specific information.

If you have questions about the ArcGIS Online map, please contact Sharon (Parkes) Payne. Questions about the eDNA sampling results can be directed to Jennifer Hernandez. Questions about the eDNA sampling grid can be directed to Dave Nagel. Please see the contact page for more information.

If you use these data, please cite as: Young, Michael K.; Isaak, Daniel J.; Schwartz, Michael K.; McKelvey, Kevin S.; Nagel, David E.; Franklin, Thomas W.; Greaves, Samuel E.; Dysthe, J. Caleb; Pilgrim, Kristine L.; Chandler, Gwynne L.; Wollrab, Sherry P.; Carim, Kellie J.; Wilcox, Taylor M.; Parkes-Payne, Sharon L.; Horan, Dona L. 2018. Species occurrence data from the aquatic eDNAtlas database. Fort Collins, CO: Forest Service Research Data Archive. Updated May 2024. https://doi.org/10.2737/RDS-2018-0010.

We would also like to credit Jennifer Hernandez for the significant amount of work she has put into developing this database.

 

If you are planning field work to collect eDNA samples, please see the aquatic eDNA sample site coordinates map.

 

Resources

Aquatic eDNAtlas Sample Results Map
Aquatic eDNAtlas Supporting Science and Peer-Review publications
Aquatic eDNAtlas Project - Field Sampling Protocol
eDNA Sampling sites coordinates to prepare for field work

The eDNAtlas

Supporting Science

FAQ & Field Protocol

eDNA Sampling Grid

 

 

 

 


Related Websites

The National Stream Internet

NorWeST: Regional Database & Modeled Stream Temperature

SSN & STARS: Tools for Spatial Statistical Modeling on Stream Networks

Climate Shield Cold-Water Refuge Streams for Native Trout

Stream Temperature Modeling and Monitoring

Climate-Aquatics Blog

U.S. Stream Flow Metric Dataset

National Genomics Center for Wildlife and Fish Conservation

Sculpins of the West - A molecular taxonomy of Cottus in western North America

The Range-Wide Bull Trout eDNA Project

Cutthroat trout-rainbow trout hybridization


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